Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01947 ATGCCCACTTGGTGGGGTAAAAAGTCCAGTAAGAGCAAGGAGCAAGAAGACCACCACCCGCATGGCAGCGGCGGCGGCGGCGGCGGCACCAGTGTTCTTCAATTCAACTTCATCAAGCCCAAGACGAGGTCCAATAAGAGCCTCGATGACGCCGCCCTCGTCCGGAATTCCCCACGTGCCACCCGTGATTTGGTTCACTCCGCCGCCGACTCCGACGAGAAGCGGGGCCTTCCCTTGCCTCGCCCCTCCGTCTCCTCCACCCAAAGCTTTTGCACCGACCAAGGCCTTATCTTAGGATCTGCCTCTTCAGGTTCTAGCTTCAGCTCCAGTGGCTCGTACGATGATCAACCCACCTATCACTCTCAGATTAATGCCGCTAGAGGGCAAGGTGACGTGAAGTTCCATGTGAGGTCTAAAAGCCCAGGTCCTGGGTCAAGAGGGCCAACCAGCCCAACATCACCTCTTCATCCGAAGTTGCTTGTTTTGAGTCTTGACTCTCCTACAGGCAGGCAAGAAGATGGAAGGGGTGAATGTCATCCATTGCCTCTTCCACCGGGTTCTCCTACCAGTCCTTCTTCTTTTCTTTCAAGCACAAGAGCAAATGGAGTGGCAGAACACACTACCGGTACCCTTTCCAAGTGGAAGAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTTTACCTGGGATTCAATAGTGATAGTGGACAATTGTGTGCAATAAAGGAAGTCAGGGTTGTTTGTGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATCAATTTGCTCAGTCAGCTTTCACATCAAAACATTGTTCAATACTATGGGAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATATGTCTCTGGTGGTTCTATTCACAAATTACTTCAGGAATATGGGGCCTTCACAGAGCCTGTTATTCAAAATTATACCAGACAGATTGTCTCTGGACTTTCCTATCTTCATGGGAGAAACACAGTGCATAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAGCATATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGCCTTCCTGTTGATATATGGAGCTTGGGGTGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAATCAATATGAAGGGGTAGCTGCAATATTTAAAATCGGTAACAGCAGAGATATGCCTGAAATCCCTGATCGTCTCTCAAGTGAGGCAAAGAATTTCATTCAGCAATGCTTACAAAGAGATCCATGTGCCCGCCCAACAGCCCAACAGTTACTAGATCATCCCTTTATTCGAGATCAGTCAGCAACAAAAGCTACAAATGTCAGAATAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGTCGGACGCCGCCGCCAGTTTTAGATCAGTCCAATAGAACTAGTAAAACTTCATTGGATGGAGATTATGCAACAAAGCGAGTTCCTGTTACTTCACGAGTAGTAAGGAGCCCAAGAGATAACACAAGAATGATCACATCTTTACCAGTATCTCCCTGTTCAAGTCCATTGCGACAGTATGGGCCAGCCCACAAGAGCTGTTTGCTTTCTCCTCCACATCCAACTTACACTTTGATGGGGCAAAATACCCTCCCGTCATATCCAGTGAGATCAAATGCCACATTCACTCTTGATCCTTTTCATGAAACATCTTTTTACAAAGCGCACACACCCGGTGGATCCCCTAGAAGACTCATTTGA 1842 0.468 MPTWWGKKSSKSKEQEDHHPHGSGGGGGGTSVLQFNFIKPKTRSNKSLDDAALVRNSPRATRDLVHSAADSDEKRGLPLPRPSVSSTQSFCTDQGLILGSASSGSSFSSSGSYDDQPTYHSQINAARGQGDVKFHVRSKSPGPGSRGPTSPTSPLHPKLLVLSLDSPTGRQEDGRGECHPLPLPPGSPTSPSSFLSSTRANGVAEHTTGTLSKWKKGKLLGRGTFGHVYLGFNSDSGQLCAIKEVRVVCDDQTSKECLKQLNQEINLLSQLSHQNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFTEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSRDMPEIPDRLSSEAKNFIQQCLQRDPCARPTAQQLLDHPFIRDQSATKATNVRITRDAFPYMFDGSRTPPPVLDQSNRTSKTSLDGDYATKRVPVTSRVVRSPRDNTRMITSLPVSPCSSPLRQYGPAHKSCLLSPPHPTYTLMGQNTLPSYPVRSNATFTLDPFHETSFYKAHTPGGSPRRLI 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01947 613 MobiDBLite consensus disorder prediction 127 208 - -
Spst9g01947 613 ProSitePatterns Protein kinases ATP-binding region signature. 220 243 IPR017441 GO:0005524
Spst9g01947 613 MobiDBLite consensus disorder prediction 499 514 - -
Spst9g01947 613 MobiDBLite consensus disorder prediction 494 514 - -
Spst9g01947 613 MobiDBLite consensus disorder prediction 1 91 - -
Spst9g01947 613 SUPERFAMILY Protein kinase-like (PK-like) 212 538 IPR011009 -
Spst9g01947 613 SMART serkin_6 214 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01947 613 Gene3D Transferase(Phosphotransferase) domain 1 211 490 - -
Spst9g01947 613 FunFam Mitogen-activated protein kinase kinase kinase 212 494 - -
Spst9g01947 613 ProSiteProfiles Protein kinase domain profile. 214 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01947 613 CDD STKc_MEKK1_plant 213 470 - -
Spst9g01947 613 MobiDBLite consensus disorder prediction 190 208 - -
Spst9g01947 613 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 478 - -
Spst9g01947 613 Pfam Protein kinase domain 215 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01947 Spst-Chr9 28575440 28580574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01947 1 533 MAP Kinase Kinase Kinase AT1G53570 55.814 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst9g01947 Pkinase 3.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01947 K04421 - gmx:100813122 1010.75