Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g01945 | ATGAATTTCCCTTGTCTTACTAGCTTCTCCGAACGTCTCGTTGCTCCTCTTTGTGCTACAGTTCCCACTACAACTATCAGGTTCCACTTTTCAGTTGGGCATTTTCTCGAACAGTTTTGTCGAAGTCTTGGATTTCCTCCCTCTTTTATTGGTTTGGTATTTTTTTTTTCCAGGGGCACTAGAGCGGACAATTTTGCAATTGAAGGGTGTAATCTAAAATTCTCATTCTCGAGGAGGCAAACGCAGGATGTACCAGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTGCTTGGACCCAATGGATGTGGAAAATCTACCCTCTTGAAGATTTTGGCCGGTCTGTTGACTCCAACTTCAGGAACAGTGAACGTGAATGGGCCTAAAACTAGTGTGGGCATTGATTTTGCCAAACCCAATCGGTTGATAGACTTAGACGCACTCAATATGCCTTCCTCTGAGATGAGGAGGTGCGGTAGCCTCTATATGGAATATTCTGGAGCTCTTTGCATGCATGGTGTGGTGCTGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATGAATTTAACTAACGATGAAGTCAGGTCTAGGGTGTCAAGAGCTTTGCACGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCCGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAAGCTGTGAGGAACTCTGTGGATACATCTGCTGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTTTGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTAGTCATGCATGGAGATGCAGCTAGCATTAGGAGTTTCATTGAAGCCAGGCAATCTGCTTATATAAGCCAGATTAATTCTTAA | 993 | 0.4512 | MNFPCLTSFSERLVAPLCATVPTTTIRFHFSVGHFLEQFCRSLGFPPSFIGLVFFFSRGTRADNFAIEGCNLKFSFSRRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKTSVGIDFAKPNRLIDLDALNMPSSEMRRCGSLYMEYSGALCMHGVVLPTVDADVAFGLGKMNLTNDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELEFADGAIYMEDGKVVMHGDAASIRSFIEARQSAYISQINS | 330 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g01945 | 330 | Pfam | ABC transporter | 87 | 253 | IPR003439 | GO:0005524 | |
Spst9g01945 | 330 | Gene3D | - | 62 | 329 | IPR027417 | - | |
Spst9g01945 | 330 | ProSitePatterns | ABC transporters family signature. | 226 | 240 | IPR017871 | GO:0005524|GO:0016887 | |
Spst9g01945 | 330 | CDD | ABC_cobalt_CbiO_domain1 | 71 | 303 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 | |
Spst9g01945 | 330 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 67 | 326 | IPR003439 | GO:0005524 | |
Spst9g01945 | 330 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 60 | 319 | IPR027417 | - | |
Spst9g01945 | 330 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 10 | 67 | 315 | - | - | |
Spst9g01945 | 330 | SMART | AAA_5 | 96 | 303 | IPR003593 | GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g01945 | Spst-Chr9 | 28568146 | 28572550 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g01945 | 67 | 308 | Calmodulin-binding Proteins | AT2G36910 | 28.112 | 2.42e-19 | 87.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g01945 | - | - | pvu:PHAVU_009G150700g | 420.239 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g01945 | 9 | 28568146 | 28572550 | Spst9g01945 | 9 | 28568146 | 28572550 | ECH |