Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01945 ATGAATTTCCCTTGTCTTACTAGCTTCTCCGAACGTCTCGTTGCTCCTCTTTGTGCTACAGTTCCCACTACAACTATCAGGTTCCACTTTTCAGTTGGGCATTTTCTCGAACAGTTTTGTCGAAGTCTTGGATTTCCTCCCTCTTTTATTGGTTTGGTATTTTTTTTTTCCAGGGGCACTAGAGCGGACAATTTTGCAATTGAAGGGTGTAATCTAAAATTCTCATTCTCGAGGAGGCAAACGCAGGATGTACCAGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTGCTTGGACCCAATGGATGTGGAAAATCTACCCTCTTGAAGATTTTGGCCGGTCTGTTGACTCCAACTTCAGGAACAGTGAACGTGAATGGGCCTAAAACTAGTGTGGGCATTGATTTTGCCAAACCCAATCGGTTGATAGACTTAGACGCACTCAATATGCCTTCCTCTGAGATGAGGAGGTGCGGTAGCCTCTATATGGAATATTCTGGAGCTCTTTGCATGCATGGTGTGGTGCTGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATGAATTTAACTAACGATGAAGTCAGGTCTAGGGTGTCAAGAGCTTTGCACGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCCGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAAGCTGTGAGGAACTCTGTGGATACATCTGCTGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTTTGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTAGTCATGCATGGAGATGCAGCTAGCATTAGGAGTTTCATTGAAGCCAGGCAATCTGCTTATATAAGCCAGATTAATTCTTAA 993 0.4512 MNFPCLTSFSERLVAPLCATVPTTTIRFHFSVGHFLEQFCRSLGFPPSFIGLVFFFSRGTRADNFAIEGCNLKFSFSRRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKTSVGIDFAKPNRLIDLDALNMPSSEMRRCGSLYMEYSGALCMHGVVLPTVDADVAFGLGKMNLTNDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELEFADGAIYMEDGKVVMHGDAASIRSFIEARQSAYISQINS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01945 330 Pfam ABC transporter 87 253 IPR003439 GO:0005524
Spst9g01945 330 Gene3D - 62 329 IPR027417 -
Spst9g01945 330 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Spst9g01945 330 CDD ABC_cobalt_CbiO_domain1 71 303 IPR015856 GO:0005524|GO:0016020|GO:0055085
Spst9g01945 330 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 326 IPR003439 GO:0005524
Spst9g01945 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 319 IPR027417 -
Spst9g01945 330 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 67 315 - -
Spst9g01945 330 SMART AAA_5 96 303 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01945 Spst-Chr9 28568146 28572550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01945 67 308 Calmodulin-binding Proteins AT2G36910 28.112 2.42e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01945 - - pvu:PHAVU_009G150700g 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01945 9 28568146 28572550 Spst9g01945 9 28568146 28572550 ECH