Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01930 ATGCAGGAAGACAAGAAGATGAAGGTGAAGAAAGGCTTTCTGGCGGTTCAAGTGGGTTTAGAAGACGAAGACCAAGGCGGTTCCTCTTCTCAGAGATTTGTCATTCCAATCTCCTATCTCTACCACCCTCTCTTCAAGCGTCTTCTCGACAAGGCTCGCGAGGTCTACGGCTACCACACCGATGGCCCCCTCAAGCTCCCCTGCTCCGTCGACGACTTCCTCCATCTCCGTTGGCGAATCGAGAAAGAGTCCACTCCCCACCAACACCACCACAACCACGCCAACCCTCGCCTTCCCCACGCTTTGCACTTCCACTCTTGTTGA 324 0.5432 MQEDKKMKVKKGFLAVQVGLEDEDQGGSSSQRFVIPISYLYHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESTPHQHHHNHANPRLPHALHFHSC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01930 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 76 IPR003676 GO:0009733
Spst9g01930 107 Pfam Auxin responsive protein 5 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01930 Spst-Chr9 27659804 27660127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01930 9 81 Calmodulin-binding Proteins AT3G43120 46.575 9.83e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01930 K14488 - gmx:100809305 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01930 9 27659804 27660127 Spst9g01930 9 27659804 27660127 ECH