Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01911 ATGTTTCAAGTCACGCAGCAAGAACTAAGCAGAGCAGAGAAAAGCAGAGATTGTATCAACTACAACAACAGCAGCAAAAAGCTTGCGAATCAGAAGATTTTTCCGTTGAAGACAAACAATAGACAAGAGAGAGGAAGAAACGCGAATGAAGGGAAATGCGCTGGTCAACCGATTGCTGTTCCTATCGTCAAAGAGATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGGAAATACCCCAACGGTTCACGGCCGAATCGCGCCGCCAGAAGTGGGTATTGGAAAGCCACCGGCGCCGATAAACCGATCGGAAAACCGAAAGCACTTGGGATCAAGAAAGCTCTGGTTTTTTACGCGGGGAAAGCCCCCAAAGGAGAGAAAACCAATTGGATTATGCACGAATATCGCCTCGCAAATGTTGATCGATCAGCCTCCAAGAAAAATAACAACTTGAGGCTTGACGATTGGGTGTTGTGTCGAATATACAACAAGAAAGGGAAGATTGAGAAACACAACACGATGACACCAAAAATGGAGACTGGGGTGGTTAATAATTTGGAGCAGGAGAAGGAGACGAAGCCGGAGATTCACAAACTTGGGAATGGGCAATTTTACATGGACAGTTCAGATTCAACGCCTAGGTTGCAGACTGACTCGAGCTGTTCAGAGCAGGTGGTTTCCCCCGATGTCACATACGAGAGGGAGGTGCAGAGCGACCCCAAATGGAATGATCTAGAGCTTCAGCTAGAAAACGCGTTTGATTTTGAATACAATTACTTTGACAACAACAACCTTTCGGTGGATGACCCTTTTGGGAGCGTCGAGTTCCAGATGGGGCAGCAGCTCTCGCCTCTGCAGGACATGCTGATGTACCTGCAGAAGCCTTATTGA 945 0.4688 MFQVTQQELSRAEKSRDCINYNNSSKKLANQKIFPLKTNNRQERGRNANEGKCAGQPIAVPIVKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAARSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKHNTMTPKMETGVVNNLEQEKETKPEIHKLGNGQFYMDSSDSTPRLQTDSSCSEQVVSPDVTYEREVQSDPKWNDLELQLENAFDFEYNYFDNNNLSVDDPFGSVEFQMGQQLSPLQDMLMYLQKPY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01911 314 ProSiteProfiles NAC domain profile. 27 182 IPR003441 GO:0003677|GO:0006355
Spst9g01911 314 Gene3D NAC domain 47 187 IPR036093 GO:0003677|GO:0006355
Spst9g01911 314 FunFam NAC transcription factor 47 186 - -
Spst9g01911 314 PANTHER NAC TRANSCRIPTION FACTOR 56 52 230 - -
Spst9g01911 314 Pfam No apical meristem (NAM) protein 51 155 IPR003441 GO:0003677|GO:0006355
Spst9g01911 314 SUPERFAMILY NAC domain 52 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01911 Spst-Chr9 26858062 26859370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01911 52 314 NAC Transcription Factor Family AT1G01720 61.818 1.27e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst9g01911 NAM 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01911 - - gmx:100814504 444.121