Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01910 ATGGATTTGGCCTCCACCTCCTCAACGCACCACAGAGCAAAGCAGAGCCTACAGCGTTCACCACCAACAACTGCAACTGCCACTGCAACAGAGAAATTTGCAAATCAGAAGACTTTTGAGTTAAGGAAGCCACACACAAGAGAAGAAACGCGAATGAAGAGTGAAATAGAGTTGCCTCCTGGATTCAGATTTCACCCCACGGATGATGAATTGGTGAACCACTATCTCTGTAGGAAATGCGCTGGTCAACCGATTGCTGTTCCTATCATCAAAGAGATCGATTTGTACAAGTTTGATCCATGGCAACTTCCGGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGGAAATACCCCAACGGTTCACGGCCGAATCGCGCCGCCGGAAGTGGGTATTGGAAAGCCACCGGCGCCGATAAACCGATCGGAAAACCGAAAGCACTTGGGATCAAGAAAGCTCTGGTTTTTTACGCGGGGAAAGCCCCCAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCAAATGTTGATCGATCAGCCTCCAAGAAAAATAACAACTTGAGGCTTGACGATTGGGTGTTGTGTCGAATATACAACAAGAAAGGGAAGATTGAGAAATACAACACGGGCACACAGAAAGTGGAGACTGGGGTGGTTAATAATTTGGAGCATGAGAACGAGACGAAGCCGGAGATTCAGAAGTTTGGGAATGAGCAATTGTACATGGACAGTTCAGATTCAATGCCTAGGTTGCAGACTGACTCCAGCTGTTCAGAGCAGGTGGTTTCCCCCGATGTGATGTGCGAGAGGGAGGTGCAGAGTGACCCCAAATGGAATGATATTGGGCTACAGCTACAAAACGCCTTTGATTTTGGATACAATTACTTTGACAACAACAACCTTTCGGTGGATGACCCTTTTGGGAGTGTAGAGTTCCAAATTGGCCAGCTCTCGCCTCTGCAGGACATGCTGATGTACCTGCAGAAGCCCTATTGA 1023 0.4761 MDLASTSSTHHRAKQSLQRSPPTTATATATEKFANQKTFELRKPHTREETRMKSEIELPPGFRFHPTDDELVNHYLCRKCAGQPIAVPIIKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNTGTQKVETGVVNNLEHENETKPEIQKFGNEQLYMDSSDSMPRLQTDSSCSEQVVSPDVMCEREVQSDPKWNDIGLQLQNAFDFGYNYFDNNNLSVDDPFGSVEFQIGQLSPLQDMLMYLQKPY 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01910 340 Gene3D NAC domain 67 215 IPR036093 GO:0003677|GO:0006355
Spst9g01910 340 PANTHER NAC TRANSCRIPTION FACTOR 56 58 253 - -
Spst9g01910 340 Pfam No apical meristem (NAM) protein 59 182 IPR003441 GO:0003677|GO:0006355
Spst9g01910 340 FunFam NAC transcription factor 67 213 - -
Spst9g01910 340 ProSiteProfiles NAC domain profile. 58 209 IPR003441 GO:0003677|GO:0006355
Spst9g01910 340 MobiDBLite consensus disorder prediction 1 55 - -
Spst9g01910 340 SUPERFAMILY NAC domain 51 209 IPR036093 GO:0003677|GO:0006355
Spst9g01910 340 MobiDBLite consensus disorder prediction 36 55 - -
Spst9g01910 340 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01910 Spst-Chr9 26830758 26832147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01910 52 340 NAC Transcription Factor Family AT1G01720 63.455 4.89e-130 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst9g01910 NAM 8.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01910 - - gmx:100814504 512.301