Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01881 ATGTCTTCTTCTGGGCTAAATGGAAGGGAGAATGAGGATTCCTTGCCTCCCCCACCACCTGTTATCCCATCAGATGTTGTGCCTGTCAAAGTAGAGCCTGAAAAGAAAAAGGTTTTGAGGCTCCCAATAGCCAGGCATGGCCTTGCTTCTAAAGGGACGAAGTTGCTACTTCAAACCAATCACTTCAGAGTGAATGTTGGAAACACTGATGGTCACTTTTTTCAGTATAGTGTATCTCTTTCTTATGAAGATGGACGTCCTGTAGAGGGCAAGGGTGTAGGGAGGAAGGTGCTAGAGAAGGTGCACGAGACATATGATTCTGAATTGAACGGGAAGGATTTTGCTTATGATGGGGAAAAAACTCTTTTTACACTTGGATCTCTTGCTCGCAACCATCTTGAGTTTACTGTTGTTCTGGAGGATGTTGTTTCTACTAGCAGAAATAATGGGAATGTCAGTCTTGATGGAATTGAAGAATCAAGTGAGAGTGACAAGAAGAGGATGAGGCGCCAAAATAGAGCCAAAACGTTTAAAGTTGAGATCAGTTTTGCTTCAAAGATTCCTTTGCAGGCCATTGTCAATGCTCTCCGTGGGCAGGATTCTGATAATTATCAAGAAGCAATAAGAGTTCTTGATATTATTCTGAGGCAGCATGCTGCCAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCATAATGATCCGAAGAATTTTACTGATGGTGAGGCACTTGTTATGGGGTATGACGACATGGGGTATAAACTATGGAAACCATATCTTAGAGCAGTTATGGAACGGGACATGAAATTTGTTAGTGAAGGAAATAAAAGCAAAGCTGAAGTTTTGGCAACTAGCTTGCAACTGATGGAAGCTTGTTTCCTAGATAGTTTCAAATAG 900 0.4211 MSSSGLNGRENEDSLPPPPPVIPSDVVPVKVEPEKKKVLRLPIARHGLASKGTKLLLQTNHFRVNVGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLEKVHETYDSELNGKDFAYDGEKTLFTLGSLARNHLEFTVVLEDVVSTSRNNGNVSLDGIEESSESDKKRMRRQNRAKTFKVEISFASKIPLQAIVNALRGQDSDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFTDGEALVMGYDDMGYKLWKPYLRAVMERDMKFVSEGNKSKAEVLATSLQLMEACFLDSFK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01881 299 Gene3D Topoisomerase I, domain 2 235 298 IPR013824 -
Spst9g01881 299 MobiDBLite consensus disorder prediction 1 26 - -
Spst9g01881 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 258 - -
Spst9g01881 299 Pfam N-terminal domain of argonaute 54 215 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01881 Spst-Chr9 24895375 24898154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01881 45 238 Eukaryotic Initiation Factors Gene Family AT5G43810 30.769 2.57e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01881 K11593 - gmx:100779439 376.711