Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01830 ATGGATGAAGGACATGTTGGAGCATGGAAGGTCAAGAACAACATAGAATGGTGGTGTGATTCTGTATTTTCTATTCATTACACTATGGATAAGTACGAGGCCGTTAAAGATTTGGGAACTGGCAATTTTGGGGTGGCCAGGCTTATGAGGAACAAGGTCACCAAGGAGCTCGTAGCCATGAAATACATCGAGCGTGGCCAAAAGATTGATGAGAACGTGGCAAGGGAGATTATGAACCACAGGTCCCTTCGGCATCCCAATATAATTCGTTACAAGGAGGTGGTTTTAACTCCCACACATTTAGCAATTGTGATGGAGTATGCAGCAGGTGGAGAGCTCTTTGAGAGGATATGCAGTGCTGGCAGGTTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTGATATCCGGTGTCCATTTCTGCCATACCATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTCTAGATGGAAGTCCTGCGCCTCGGTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTGCACTCACGACCCACCTCCACGGTTGGAACACCAGCTTATATAGCACCGGAAGTTCTTTCTAGGCGAGAGTACGATGGAAAGTTGGCTGATGTATGGTCGTGTGGAGTGACTCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCTAGGAATTTTAGGAAAACAATACAGCGTATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGATTGTAGACAACTCCTCTCTCGTATATTTGTTGCAAATCCATTGAGGAGAATTACTATTAAGGAAATTAAGAGCCACCCGTGGTTTTTGAAGAACCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTATGTATTACCAAAGAGACAGCCCAAACTTTCACCTTCAAAGTGTGGACGAGATAATGAAAATTGTCGGAGAGGCAAGAAATCCACCTCCAGTATCTAGACCTGTCAAAGGTTTTGGCTGGGAAGGTGAAGAAGATTTGGATGAAGAAGTGGAGGAAGAGGAGGATGAAGATGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGGGAATTCCAGATTACTTAA 1134 0.4365 MDEGHVGAWKVKNNIEWWCDSVFSIHYTMDKYEAVKDLGTGNFGVARLMRNKVTKELVAMKYIERGQKIDENVAREIMNHRSLRHPNIIRYKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPTSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRQLLSRIFVANPLRRITIKEIKSHPWFLKNLPRELTESAQAMYYQRDSPNFHLQSVDEIMKIVGEARNPPPVSRPVKGFGWEGEEDLDEEVEEEEDEDEYDKRVKEVHASGEFQIT 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01830 377 SUPERFAMILY Protein kinase-like (PK-like) 16 324 IPR011009 -
Spst9g01830 377 SMART serkin_6 32 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01830 377 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Spst9g01830 377 MobiDBLite consensus disorder prediction 344 361 - -
Spst9g01830 377 PANTHER SERINE/THREONINE KINASE 30 326 - -
Spst9g01830 377 Pfam Protein kinase domain 32 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01830 377 CDD STKc_SnRK2 31 287 - -
Spst9g01830 377 Gene3D Transferase(Phosphotransferase) domain 1 108 295 - -
Spst9g01830 377 Gene3D Phosphorylase Kinase; domain 1 18 107 - -
Spst9g01830 377 FunFam Serine/threonine-protein kinase SRK2A 108 296 - -
Spst9g01830 377 FunFam Serine/threonine-protein kinase SRK2E 29 107 - -
Spst9g01830 377 ProSiteProfiles Protein kinase domain profile. 32 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01830 377 MobiDBLite consensus disorder prediction 332 377 - -
Spst9g01830 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01830 Spst-Chr9 22481119 22484377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01830 31 291 CBL-interacting serine-threonine protein kinases AT4G24400 42.910 6.68e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst9g01830 Pkinase 2.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01830 K14498 - gmx:547811 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01242 3 15915470 15918588 Spst9g01830 9 22481119 22484377 PCT