Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01828 ATGAGGAAATCTTGTGGGTTCTTCTTCTTGCTCCTCCTCCTTGTCTTTGCATCCCAGGTGGTGGTGCAGACGGAGGGAAGAGTGTGCGAGTCACAGAGCCACGGGTTCAAGGGTGCGTGTTCTGGTGACCATAACTGTGCTCTGGTCTGCAGGAACGAAGGTTTCTCCGGTGGAAAGTGCAGAGGCTTCCGTCACCGATGCTTCTGCACCAAGATTTGTTGA 222 0.536 MRKSCGFFFLLLLLVFASQVVVQTEGRVCESQSHGFKGACSGDHNCALVCRNEGFSGGKCRGFRHRCFCTKIC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01828 73 Gene3D - 27 73 IPR036574 -
Spst9g01828 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Spst9g01828 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Spst9g01828 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Spst9g01828 73 Coils Coil 71 73 - -
Spst9g01828 73 Pfam Gamma-thionin family 27 73 - -
Spst9g01828 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Spst9g01828 73 CDD Knot1 38 70 IPR003614 GO:0006952
Spst9g01828 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Spst9g01828 73 SMART gth_4 28 73 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01828 Spst-Chr9 22089673 22090004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01828 9 73 Plant Defensins Gene Families AT5G63660 60.000 2.48e-26 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01828 - - gmx:547938 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01828 9 22089673 22090004 Spst9g01828 9 22089673 22090004 ECH