Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01827 ATGCAAAGGATCAGGAAGTCCTTCAAATCTTATGGTTCCTCCAAACAATCCAAAAGGTTTTCCGGCACCGGAAACCCAAATTCTGACCACGAGCATCTTCCTATTCTCCTCGAACAACAAGAAGCGCACCGCGACAACGAAATGCACACTGACGACTACGTCGTCAAAATCGATGACGCCAATAATCCTTCGAAGGGAAATAAGATTTGGCGCAGATCAAGTTACGAATTTTGGGGTGGCGAAGGCTCCTCCGCTGCTGCTGCCGACGACGACAGTTTCGATTTTCGTCAGGCGGAAGACCCGCCGTCGCAGTTGATCGGGCGCTTCCTCCACAAACAGAAGGCCTCCGGGGAATTACAACTCGATATGGATTTGGAGATGGAGGAACTCCAGCGCGAGACCGAAGAAGGAAGGTTAACGCCGGTGGAAGAGTCTCCGATGAACTACCGCACCTCCAGGGAGCTGAAAGTCTCCTTCGATGAACCCTCTTCCAGCATGAATCTCGGGCAGAACGACGTCTTCAGGAGAAGGCACAGCAAGGAGTCGCCATCGTTAACGGATTACAACCGCCCACCACAACCGCCGCAGCATGATCGTCGCCGCTCGCCTTCGCCGTCGCCTAGCAGCGACGGCGAGGTTCTGCGGTGCACCTCGAACGCTTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCAGCGTTGTTGAAGGCGAAAACGAGGTCCAGGTTGATGGACCCGCCAGACGAATCGAGTCGAGTTTTAAAATCGGGTCAGCTTGTTTCAGGGTTTCTAGGGAAGAAAGGCGACGAGGAGGAGGATGATCCGTTTTTGGAAGACGATCTTCCTGATGAACTTACGAAGACTCATTTCAGCTTCTGGATTCTTCTGGAGTGGGTGAGTTTGGTTTTGATCATTGGGTTGTTGATAACTACCCTTTGCATTCCTTTTCTGAGGGATAAGGATATGTGGCAGCTAAGGTTGTGGAAATGGGAGGTTATGGTTCTGGTTTTGATCTGTGGGAGGTTGGTGTCTGATTGGGTTGTTAGGATTGCTGTGTTCTGTATTGAGAGGAACTTCCTTTTGAGGAAGAGGGTGTTGTATTTTGTGTACGGTGTGAAGAAGGCGGTTCAGAATTGTGTTTGGTTGGGGCTCGTGTTGATTGCGTGGCATTTGTTGTTTGACAAGAGGGTGCAGAAGGAGGCCCACAGTGGTTTCCTGGAGTATGTTAATAAGGTGTTGGTGTGTTTCCTTGTGGGGACTTTGGTGTGGTTGCTGAAGACTCTCGTGGTTAAGGTCTTGGCCTCTTCTTTCCATGTGAGTACCTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAGACGCTTTCGGGGCCTCCTTTGGTGGAGATTAAGAGGGCTGAGGAGGAGGAGGAGAGGCTTGCTGAGGAGGTACAGAAGCTGCAGAATGCTGGGGTTACCATACCCCCTGACCTTAGGGCAACTGCTTTTTCTACTAATAAGAGTGGGAGGTTGAAGAGTGGAATGCTCCCCAAGAGCCCTATAGGTAGGAGTGGCAAGTTTTCGCACCCTCTTTCTAAGCATTCTGACGATGGGAATGTCATCACCATCGATAACCTGCATAAGCTCAATCCCAACAATGTGTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCCCTTTCTACCTTAGATGAACAGATACTTGACAATGCCCATGACGATGAGAAGAACACGCAAATTAGAAGTGAAATTGAGGCAAAAGCTGCTGCTAAAAAAATATTTCATAATGTTGCTAGGCGTGGGTGCAGGTTTATATACCCGGATGACTTGATGCGGTTTATGCAAGAAGATGAAGCTGCAAAAACTATGAATCTCTTCGAAGGAGCATCTGATTCTGGAAAAATAAGTAAAGCAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAGAGGAAAGCACTTGCTTTGACACTGAATGACACCAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGCAATCGTTATAGTGATTATTTGGCTCTTGTTATTAGAACTTGCCACCACCAAATTTCTTGTCTTTTTGAGTTCACAGATTGTCTTGGTTACATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCCTTTTTGTCATGCATCCTTTTGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGATTGTAGAAGAAATGAACATATTGACAACCATATTTTTGAAATTTGATAATCATAAGGTCATCATCCCTAACAGTGTCCTTGCTACCAAAGCTATATTTAACTATTACCGGAGTCCTGACATGTCAGATATTATCGAATTCTACGTACATATGTGTACTCCAATTGATAAGATTTCCCTTATCAAACACAGAATAGAAAATTTCTGTGATAACAAGAAGGAGCACTGGTATCCTGCACCTACTGTAGTAGTCAGGGATCATTATTCATTAGACATGGTGAAAATGGCTATCTGGCCAAATCATAGGATGAACTTCCAAGACCAGGTAGAAAGGTATGTGAGGAGATCCCTTTTGCTTGAAGAGTTGATGAAGATTTTCAGGGAGCTCGACCTTAATTACCGTTTCCTGCCTATGGACGTTAACGTGAGAGCCGTGCCTACCTTTTCTGAAAGGCTTCCACCTAGTTGGGCATCGATTGCAAGTTGA 2739 0.4593 MQRIRKSFKSYGSSKQSKRFSGTGNPNSDHEHLPILLEQQEAHRDNEMHTDDYVVKIDDANNPSKGNKIWRRSSYEFWGGEGSSAAAADDDSFDFRQAEDPPSQLIGRFLHKQKASGELQLDMDLEMEELQRETEEGRLTPVEESPMNYRTSRELKVSFDEPSSSMNLGQNDVFRRRHSKESPSLTDYNRPPQPPQHDRRRSPSPSPSSDGEVLRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPDESSRVLKSGQLVSGFLGKKGDEEEDDPFLEDDLPDELTKTHFSFWILLEWVSLVLIIGLLITTLCIPFLRDKDMWQLRLWKWEVMVLVLICGRLVSDWVVRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWHLLFDKRVQKEAHSGFLEYVNKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIKRAEEEEERLAEEVQKLQNAGVTIPPDLRATAFSTNKSGRLKSGMLPKSPIGRSGKFSHPLSKHSDDGNVITIDNLHKLNPNNVSAWNMKRLMNMVRHGALSTLDEQILDNAHDDEKNTQIRSEIEAKAAAKKIFHNVARRGCRFIYPDDLMRFMQEDEAAKTMNLFEGASDSGKISKAALKNWVVNAFRERKALALTLNDTKTAVNKLHRMLNFIVAIVIVIIWLLLLELATTKFLVFLSSQIVLVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMIVEEMNILTTIFLKFDNHKVIIPNSVLATKAIFNYYRSPDMSDIIEFYVHMCTPIDKISLIKHRIENFCDNKKEHWYPAPTVVVRDHYSLDMVKMAIWPNHRMNFQDQVERYVRRSLLLEELMKIFRELDLNYRFLPMDVNVRAVPTFSERLPPSWASIAS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01827 912 MobiDBLite consensus disorder prediction 158 172 - -
Spst9g01827 912 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 40 907 IPR016688 -
Spst9g01827 912 SUPERFAMILY Sm-like ribonucleoproteins 727 786 IPR010920 -
Spst9g01827 912 MobiDBLite consensus disorder prediction 130 214 - -
Spst9g01827 912 Gene3D - 737 786 IPR023408 -
Spst9g01827 912 MobiDBLite consensus disorder prediction 1 33 - -
Spst9g01827 912 FunFam Predicted mechanosensitive ion channel 737 786 - -
Spst9g01827 912 PIRSF Memb_At2g17000 12 912 IPR016688 -
Spst9g01827 912 Coils Coil 464 490 - -
Spst9g01827 912 MobiDBLite consensus disorder prediction 1 28 - -
Spst9g01827 912 Pfam Mechanosensitive ion channel 679 867 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01827 Spst-Chr9 22045800 22049171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01827 52 912 Mechanosensitive Ion Channel Family AT1G78610 55.934 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01827 K22048 - gmx:102665658 1363.59