Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01822 ATGTCCTGGTTTCGATTTCCACCCCAGATCCTTGAGAGAGATTTGATCTCCTCCACGGGCTTCATGTTAGCCAGCGATTCACAGGGAGGGGCATTCAGGCACCTGCCCTTTTCAGTTGCCAGTGGTGAAGGAAGCAGAGGGGTCGCGGACGCGCACGCGGTCGGGGTTGGCAACAAGGGGGGGTCGCGGGCACAGGGCTACGGTGAGGAGTTGGCGGCGTGGGCAAAGCCCATGGTGGCTAGGTGTCGTGTGGTGAGAGTGAAGATGCAAAGAGGTGGGACTGGACTTATGGTGGTGGCCTGCAGGATGAAGGTTAAGGGTGGTGAGTGGAAGGTTGGGATGCGAGGCCGCAAGAGGGAAGAAAGATCTGAGATTCACTACGCTTCGCATACCCAAACCCTAACTCCACGGGTGGCCAAAGCCAGCGCCGATTCGATGTCGAGTTTCCACGTCGGCGGCAAGGTGGTGGACCGCGTCGATTTGCTCAGGAAAAAGCAATTGCCGTGGCGTCTCGATGTTTGGCCTTTTGCCGTTCTATATGGCGCGTGGGTTTCGGTGATTCTTCCCAGCCTCGAGTTTGTGGATGCGGCGATCGTTGTAGGCGCACTCCTCGCTCTTCACATCCTCGTCTGGCTCTTCACTGGATGGTCCGTTGATTTCAAATGCTTCGCTCACTATAGCAAGGCTAAAAATATTGACCAGGCTGATTCCTGCAAGATTACTCCGGCTAAGTTCTCAGGCTCTAAAGAAGTTGTTCCACTTCATTCTCGGAGAAGTATTTTGGGGGTGAGTGGTGGAGTTTGTGCATGGAATATATCTCAGGAAAACTATCAAGTTCTGGGAGAAATTCAAGACTTTTTTAGGACCACTTATTGTCACACGGCAGGATTACCTCTGGAACTCTTGCTGAAGGGGCTCAAAATCATTGTTTTGAAAACTGGACCTGGCGAACGATTTGATTTGGACTGGCTTGGTGATTGGTTTGAACATCATCTCAATTATCGATTGGAATTGTGGCCTCTGGGGGCGGGGCAAGTCCTTGAAGTTCTCAAGTTTGCAGTTGAATTTGATAACACTGAGGATAGTTTTCAGTCTGCAGGTTCTTCATCAGCTGTGGATTTGGAAGAGAACTACTTTGATTTTAGAAAACAATGTTTTGTGTATTCAAAGGAGAAGGGAACTTTTTGCAAACTTTCCTACCCTACCAAAGAAACATTTGGATATTACATCAAATGCAGTGGCCATGGCTCTGAAGCTAAAGTTCTTGCAGCTACTGAGAAATGGGGACGGAATGAAGACACATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGTATGGAGCCTTTTTTCGTGTTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGACGAATATTGGTATTACAGTTTGTTCACTCTATTTATGTTGTTTATGTTTGAGTCAACCATGGCGAAAAGTCGGTTGAAAACTCTAACCGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCGTGGTGGCAAGTGGGTGAAACTCTCTGGTACAGACCTTTTACCGGGGGATGTTGTCTCCATAGGCCGCTCTTCTGGTCAGAATGGGGAGGAGAAGTCTGTACCAGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAGTGGAAGATTTCAATTGCGGGTAGAGGGATGGAGGAGAAATTGTCAGCAAAGCGAGATAAAAGTCATGTTTTATTTGGAGGAACTAAAATATTGCAGCACACTCCCGATAAGAGTTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTGCTGAGAACGGGTTTCGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTCTTATTGCTGCTGGTTATGTGCTTGTTAAGGGTCTGGAAGATCCCACAAGGAGCAAGTATAAACTTATACTTAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCCGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTTATTGCACTGGCACGGCGAGGAATCTTTTGCACAGAGCCTTTTCGGATTCCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACAGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGAATGGGAGTACAGATTTGGAAACTGATACGAGTAGAGTGCCTGTGCGTACTGTCGAGATCCTGGCTTCTTGCCATGCATTGGTTTTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTCAAGGGAATTGACTGGAGTTATAAATCTGATGACAAGGCTGTCCCAAAAAAGGGAAATGGACATCCTGTCCAAATTGTTCATCGGTACCATTTTGCATCTCACCTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGATGATTTTTTCTCATTTGTGAAGGGTGCCCCAGAAGTTATAGAATATAGGCTCATTGATATACCACCATCATATGTTGAGACCTACAAAAAATACACACGTCAAGGGTCTCGTGTTCTTGCTCTGGCTTACAAATCTCTCGCTGACATGACAGTCAGTGAAGCTAGAAACATGGATAGGGATATTGTGGAGAGTGGACTAACGTTTGCGGGTTTTGTGGTATTTAACTGTCCCATAAGATCAGATTCAGCCACTGTTTTATCTGAATTAAAAGGATCATCACATGACTTGAATCTATGTGGTCATCTTAGTGGGAATAGGGCTTGGATCACATTCAAACAAGATTTAGTAAGATTGTCTGGGATTACAGGATTGGTTGTGGAATTGGATGACCCAATCATGCTGGCCTAA 2958 0.454 MSWFRFPPQILERDLISSTGFMLASDSQGGAFRHLPFSVASGEGSRGVADAHAVGVGNKGGSRAQGYGEELAAWAKPMVARCRVVRVKMQRGGTGLMVVACRMKVKGGEWKVGMRGRKREERSEIHYASHTQTLTPRVAKASADSMSSFHVGGKVVDRVDLLRKKQLPWRLDVWPFAVLYGAWVSVILPSLEFVDAAIVVGALLALHILVWLFTGWSVDFKCFAHYSKAKNIDQADSCKITPAKFSGSKEVVPLHSRRSILGVSGGVCAWNISQENYQVLGEIQDFFRTTYCHTAGLPLELLLKGLKIIVLKTGPGERFDLDWLGDWFEHHLNYRLELWPLGAGQVLEVLKFAVEFDNTEDSFQSAGSSSAVDLEENYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYIKCSGHGSEAKVLAATEKWGRNEDTFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRGGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKSHVLFGGTKILQHTPDKSFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGSTDLETDTSRVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDDKAVPKKGNGHPVQIVHRYHFASHLKRMAVVVRIQDDFFSFVKGAPEVIEYRLIDIPPSYVETYKKYTRQGSRVLALAYKSLADMTVSEARNMDRDIVESGLTFAGFVVFNCPIRSDSATVLSELKGSSHDLNLCGHLSGNRAWITFKQDLVRLSGITGLVVELDDPIMLA 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01822 985 SUPERFAMILY Calcium ATPase, transduction domain A 507 639 IPR008250 -
Spst9g01822 985 Pfam E1-E2 ATPase 510 720 - -
Spst9g01822 985 PANTHER CATION-TRANSPORTING ATPASE-RELATED 157 946 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Spst9g01822 985 FunFam Cation-transporting ATPase 736 920 - -
Spst9g01822 985 Pfam Cation transport ATPase (P-type) 791 863 - -
Spst9g01822 985 Gene3D - 747 927 IPR023299 GO:0000166
Spst9g01822 985 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 746 930 IPR023299 GO:0000166
Spst9g01822 985 NCBIfam P-type ATPase of unknown pump specificity (type V) 367 949 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Spst9g01822 985 NCBIfam HAD-IC family P-type ATPase 655 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g01822 985 FunFam Cation-transporting ATPase 478 640 - -
Spst9g01822 985 Gene3D - 476 640 - -
Spst9g01822 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 742 748 IPR018303 -
Spst9g01822 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 417 734 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01822 Spst-Chr9 21814433 21835364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01822 364 957 Primary Pumps ATPases AT5G23630 80.168 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01822 K14950 - gmx:100789385 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01822 9 21814433 21835364 Spst9g01822 9 21814433 21835364 ECH