Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01821 ATGTCAGACTGGTTTCTGCGAAGGCCTTTACTAGCTGCTTATGTTCAACGTGTGATGATTACCGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATATCAAAACCTACATTGATCCTTGGCCCAGCACGAAATGGTGAGGGATATAATTGGCTGTCTCCTGATGAGACTGAAAACATTCGCTACAGTGAGAAAGAGGTTGAATCTTTATCAGAGACCCATGATCTCTGTATTGGAGGTGATTGCATTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTCCTCATGTGAAGGTTTTTGCCAGAGTTGCTCCCGAGCAAAAAGAACTTATCTTGACCACTTTCAAAACAGTTGGACGGTTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGTTGTCAAAACAGGCCACTAGGCTTCCTGGTTTGGCTGCCACGGTTGAGCTCAAAGATAAGCCAGAAACCTGTGAGGCCCACGTAGGAATCGCTCTTCTGAATGCAATTCCTCCAACTCAAAGTGGAAACTCTTCTTCAGAGTCGTCGAAGGAAGATGGTTCAAAATCTGTCAAGCTAAAGAAATCTAAGACTGCACTGGACACATCTGGAAAGAGTGCTGGTGAAGGCACTTCCAAAGCCAAAGCTGCTTCAAAATCAGATTCCACTAGCCACTCATCTGGTAACCGTCATCAAGCAGCTGCTGAGATGCAACGCCAGAAGCTTAAGAAGATGATTGATGAGCTTAATGAGGAAGGAGATGGTCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCGTCTCCGTTCACTGCTAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGGAGTACTCTAGTGACAACCCTGCAGATGTTCAAAATTCTGGGTCTCAACTGTCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTAGATGGTGTCAAACTAGGTGACGTACAAGCCACAATAAGTGGTGTATTCACTGCTGCATTTTTCCTCTTCATCTCACATGCACGCCCTCTTCCCACTCTTTCTGCTGAACGTCCTCACCCTAACATCTTCTGTGCTTATGTTTTCCTTTCCCTCTTGGGACAATTTTCTATTCACCTGCTTTTCCTTATTTCGTCTGTGAAAGAAGCTGAAAAATACATGCCAGATGAATGCATTGAACCTGATGCTGATTTTCATCCTAACCTGGTGAATACGGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTCGCTGTGAACTATATGGGCCACCCGTTCAACCAGAGTATTTCTGAAAACAGACCGTTCCGGTATGCACTTGTTGCTGCTGTTATTTTCTTTACCGTGATTACATCTGATATCTTCAGGGACTTGAATGACTGGTTGAAGTTAGTGCCATTGCCGGTGGGATTAAGGGATAAACTATTGATTTGGGCGTTTCTAATGTTTTTGGTTTGCTACTCGTGGGAGAGACTATTGAGATGGGCATTCCCTGGTAAGATCCCGGCTTGGAAGAGGCGACAACGACTTGCTGTATCTAATTTAGAAAAGAAGAAACAGGTCTAA 1614 0.4461 MSDWFLRRPLLAAYVQRVMITGDQALTACHVASQVHIISKPTLILGPARNGEGYNWLSPDETENIRYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLLVIPHVKVFARVAPEQKELILTTFKTVGRLTLMCGDGTNDVGALKQLSKQATRLPGLAATVELKDKPETCEAHVGIALLNAIPPTQSGNSSSESSKEDGSKSVKLKKSKTALDTSGKSAGEGTSKAKAASKSDSTSHSSGNRHQAAAEMQRQKLKKMIDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVIFFTVITSDIFRDLNDWLKLVPLPVGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKIPAWKRRQRLAVSNLEKKKQV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01821 537 SUPERFAMILY Calcium ATPase, transmembrane domain M 298 514 IPR023298 -
Spst9g01821 537 MobiDBLite consensus disorder prediction 180 194 - -
Spst9g01821 537 Gene3D - 8 194 IPR023214 -
Spst9g01821 537 Coils Coil 242 262 - -
Spst9g01821 537 MobiDBLite consensus disorder prediction 210 244 - -
Spst9g01821 537 MobiDBLite consensus disorder prediction 195 209 - -
Spst9g01821 537 MobiDBLite consensus disorder prediction 180 250 - -
Spst9g01821 537 PANTHER CATION-TRANSPORTING ATPASE-RELATED 170 513 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Spst9g01821 537 SUPERFAMILY HAD-like 11 144 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01821 18 537 Primary Pumps ATPases AT5G23630 70.881 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01821 K14950 - gmx:100789385 884.019