Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01783 ATGGATCCGGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCACGAACCGTCCTCCCCGCCGCGCCGCCCCCGCGTCCCCCGCCGCCACTCCTCGACTACGCGGTCGCTCCTCCCGCCGTCGCCCCCGTCTACCATCCTCCCAGGGCGGCGCCGCGCGAGCTCGGCGGCCTCGAGGAGCTCTTCCAGGCCTACGGCATCCGCTACTACACGGCGGCGAAGATCGCCGAGCTCGGCTTCACGGTGAGCACGCTGGTGGACATGAAGGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGACCTCCTCGTCGGCGAACGCTACGGCATCAAAGCAGCCGTCAGAGCTGAACGACGTCGCATCGACGACGAAGACATCAAACGCCGTAATACCAACCTCCTTTCCACCGACACCACCACCACCAACGCCCTCGATGCCCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGAAGCACGTGGGAGGTGGTTGCGGCGGAGGAGAGGAGAAAGCAGCAGAGAAGGCGGAGGACGAGGATGAAGGCGAATCTTCAGCAGGAAGATAACGAGGAGCTTGAGGATGAGGAGGGAGAAGAGAATGAGGAAGGGAACAACAACAGTGGTGGAGGATGCGAGAGGCAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAACGGTTTGGATTATCTGTTTCATCTCTACGAGCAGTGCCGTGAGTTCTTGATGCAGGTTCAGGCCATCGCGAAGGACCGTGGTGAAAAATGCCCCACCAAGGTGACGAATCAGGTATTTAGGTATGCGAAGAAAGCTGGAGCAAGCTACATCAACAAGCCAAAGATGCGACACTACGTGCACTGCTACGCTTTGCATTGTCTCGACGAGGAGGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCGTGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGACATTGATGCCATATTCAACGCACACCCTCGTCTTTCCATTTGGTACGTTCCGACGAAGCTCCGTCAGCTTTGTCACGCCGAGAGGAACAGCGCCGCCGCTTCGAGCTCCGTGTCCGCCGGCAGCGCCCTCCTTCCCTTCTAA 1215 0.5992 MDPDAFTASLFKWDPRTVLPAAPPPRPPPPLLDYAVAPPAVAPVYHPPRAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDEDIKRRNTNLLSTDTTTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVVAAEERRKQQRRRRTRMKANLQQEDNEELEDEEGEENEEGNNNSGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSAGSALLPF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01783 404 MobiDBLite consensus disorder prediction 154 232 - -
Spst9g01783 404 Coils Coil 181 220 - -
Spst9g01783 404 Pfam Floricaula / Leafy protein SAM domain 54 130 IPR035079 -
Spst9g01783 404 MobiDBLite consensus disorder prediction 206 220 - -
Spst9g01783 404 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 225 390 IPR035209 GO:0003677
Spst9g01783 404 PANTHER PROTEIN LEAFY 1 398 IPR002910 GO:0003677|GO:0006355
Spst9g01783 404 Gene3D Protein LEAFY 227 396 IPR038276 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01783 1 388 Orphan Transcription Factor Family AT5G61850 66.749 3.71e-165 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Spst9g01783 C_LFY_FLO 4.8e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01783 - - gsj:114416001 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01783 9 20154671 20156980 Spst9g01783 9 20154671 20156980 ECH