Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01765 ATGGATTCAACTACTGCTGGAAAGGTCATAAAATGCAAAGCTGCGGTGGCATGGGAAGCCGGAAAACCACTGGTGATAGAGGAAGTTGAGGTAGCTCCACCACAGGCGAATGAAGTTCGTCTGAAGATCCTGTTTACCTCACTCTGCCACACTGATGTCTACTTCTGGGAAGCCAAGGGACAGACACCTTTATTTCCACGGATATTTGGCCATGAAGCAGGAGGAATCGTGGAAAGTGTTGGTGAGGGTGTGGCAGATCTCAAGCCTGGTGATCATGTGCTTCCAGTCTTCACAGGGGAGTGCAAAGAGTGTGATCATTGCAAATCAGAGGAAAGTAACATGTGTAACCTCCTAAGGATTAACACTGACCGTGGAGTGATGCTGAATGATGGCAAGTCAAGGTTTTCAATCAATGGACAACCAATATACCACTTTGTCGGAACCTCCACTTTCAGTGAATACACTGTAGTCCATGTTGGCTGTGTTGCCAAGATCAACCCCACTGCCCCACTTGACAAAGTTTGTGTTCTGAGCTGCGGTATCTCAACAGGTCTTGGTGCTACATTGAATGTTGCAAAACCAAAAAAAGGTTCATCAGTAGCTATATTTGGATTGGGAGCTGTGGGGCTTGCTGCTGCCGAGGGAGCCAGACTTGCTGGTGCTTCCAGGATAATTGGGGTTGACTTGAATTCCAAGAGATTTGCAGAAGCCAAGAAGTTTGGAGTTACTGAGTTTGTGAATCCAAAAGATTATGACAAGCCAGTTCAAGAGGTGATTGCTGAAATGACTGATGGGGGAGTTGATGAAGTGTTGAGTGTACTGGAAGTGTCCATGCTATGA 840 0.4643 MDSTTAGKVIKCKAAVAWEAGKPLVIEEVEVAPPQANEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVADLKPGDHVLPVFTGECKECDHCKSEESNMCNLLRINTDRGVMLNDGKSRFSINGQPIYHFVGTSTFSEYTVVHVGCVAKINPTAPLDKVCVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARLAGASRIIGVDLNSKRFAEAKKFGVTEFVNPKDYDKPVQEVIAEMTDGGVDEVLSVLEVSML 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01765 279 FunFam S-(hydroxymethyl)glutathione dehydrogenase 184 277 - -
Spst9g01765 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 273 IPR036291 -
Spst9g01765 279 Pfam Alcohol dehydrogenase GroES-like domain 37 163 IPR013154 -
Spst9g01765 279 PANTHER ALCOHOL DEHYDROGENASE 7 270 - -
Spst9g01765 279 Gene3D - 20 183 - -
Spst9g01765 279 Pfam Zinc-binding dehydrogenase 207 272 IPR013149 -
Spst9g01765 279 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Spst9g01765 279 Gene3D - 184 273 - -
Spst9g01765 279 FunFam alcohol dehydrogenase 1-like isoform X1 20 183 - -
Spst9g01765 279 SUPERFAMILY GroES-like 5 187 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01765 Spst-Chr9 19506690 19509077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01765 38 270 Monolignol Biosynthesis Gene Families AT4G37980 26.068 9.68e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01765 K18857 - gmx:100783318 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01765 9 19506690 19509077 Spst9g01765 9 19506690 19509077 ECH