Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01760 ATGAGAAAACCCAATAAACCCACCCCTACTGCATTCCTACCAATCTCAATCCTCAGATCCACCCTCTTCCTCCTCCTCCTCTCCATGGCATCCCTCTTCTTGCTCTTCATCCTCTTCTTCATTCAACTCCACCCTCAATCCTCTGCCGTGGAGATCCACCAAGTCTGCAATGCCACGAGCTTCCCTTCCAAATGCCGCCACTCCCTCAGCCCCCACCTCCCTCCCAACCCCACCCCTCTCAAAATCATCCAATCCGCCATCAAAGCTTCCTCCTCCAATCTCATAACCGCTCGATCCATGGTGCAGTCCATCGTCGGCGCCTCCAAAGGCAACCAAACCCGCACCACCATCGCCAAAAGTTGCCTCCAGGTCCTCCACTACTCCCGCCACCGCACCTCCCTTACCGCCGACGCGCTCCAGCGCGGCGCCATCAAGGATGCGCGCGCCTGGATGAGCGCTGCCCTCGGCTACCAGTACGGTTGCTGGAACGGCCTTAAGTACATCGACCACACGCCACAGGTCGCCGAAACGATGACATTCCTTGACTCTCTTGTGACGCTCTTCAGCAACGCTCTCAGCATGATGGTCTCCTACGACCTCTTCGGAAACGACACCGCGTTGTGGAGGCCGCCAATGACGGAGCGCGACGGTTTCTGGGAGCCGTCCGGGACGAGGAGACTCGGGGCGGGACCCAAGATTCCGTCGAAATTGAAGGCGGACGTTACGGTGTGTAAGGGTGGCGGGTGTTATGGGACGGTGCAGGAAGCGGTTAACGCGGCGCCGGATAACGCGAAAGGGAGATTTGTGATATATATAAAGGAAGGGGTTTATGAGGAGAGGGTGAGGGTTCCGTTGAGGAAGAAGAATGTGGTGTTCTTGGGGGATGGCATTGGTAAGACTGTGATCACGGGATCTGCTAACGTGGCCCAGCCGGGTGTGACCACCTACAACTCTGCCACTGTAGGAGTTGCCGGGGATGGATTTATAGCAAAGGATCTCACGATTCAGAACACGGCTGGTGCTAAAGCTCACCAAGCAGTGGCCTTCAGATCAGACAGTGATCTTTCTGTCATTGAGAACTGTGAATTCATAGGTAACCAAGACACTCTTTATGCACATTCCCTGCGCCAATTTTATAAATCTTGCCGCATAGTAGGCAACGTGGACTTCATCTTTGGGAACTCGGCGGCGATCTTCCAGGACTGTGAAATCCTAGTCCAACCCCGGCAAGGCAGACCAGAGAAGGGTGAGAGCAATGCCATTACTGCACAAGGCAGGACTGACCCTGCTCAGTCAACAGGATTTGTTTTCCAGAACTGTATAGTTAATGGTACGGAGGAATACATGGCATTTTATTATAGCAAGCCTAAAGTTCACAGAAACTATCTGGGGAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATCCATTCATACTTGGAAGCCTTTATCACACCAGAGGGCTGGATGCCATGGTCTGGGGATTTTGCTTTGAAAACGCTTTACTATGGGGAATATGAGAACTCAGGACCTGGTTCTAATCTGAGTGGGAGGGTATCCTGGAGTAACGAGGTCCCAGCCGAGCACGTCTTCTCGTATTCAGTGCAGAGTTTCATTCAAGGAGATGATTGGAATCATCATTTCACTCATTAG 1653 0.5275 MRKPNKPTPTAFLPISILRSTLFLLLLSMASLFLLFILFFIQLHPQSSAVEIHQVCNATSFPSKCRHSLSPHLPPNPTPLKIIQSAIKASSSNLITARSMVQSIVGASKGNQTRTTIAKSCLQVLHYSRHRTSLTADALQRGAIKDARAWMSAALGYQYGCWNGLKYIDHTPQVAETMTFLDSLVTLFSNALSMMVSYDLFGNDTALWRPPMTERDGFWEPSGTRRLGAGPKIPSKLKADVTVCKGGGCYGTVQEAVNAAPDNAKGRFVIYIKEGVYEERVRVPLRKKNVVFLGDGIGKTVITGSANVAQPGVTTYNSATVGVAGDGFIAKDLTIQNTAGAKAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSAAIFQDCEILVQPRQGRPEKGESNAITAQGRTDPAQSTGFVFQNCIVNGTEEYMAFYYSKPKVHRNYLGRPWKEYSRTVFIHSYLEAFITPEGWMPWSGDFALKTLYYGEYENSGPGSNLSGRVSWSNEVPAEHVFSYSVQSFIQGDDWNHHFTH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01760 550 SUPERFAMILY Pectin lyase-like 237 547 IPR011050 -
Spst9g01760 550 NCBIfam pectinesterase inhibitor domain 28 193 IPR006501 GO:0004857
Spst9g01760 550 PANTHER PECTINESTERASE 34 544 - -
Spst9g01760 550 Pfam Pectinesterase 240 542 IPR000070 GO:0030599|GO:0042545
Spst9g01760 550 FunFam Probable pectinesterase/pectinesterase inhibitor 51 50 197 - -
Spst9g01760 550 Pfam Plant invertase/pectin methylesterase inhibitor 52 194 IPR006501 GO:0004857
Spst9g01760 550 CDD PMEI-like_3 55 195 - -
Spst9g01760 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 197 IPR035513 -
Spst9g01760 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 194 IPR035513 -
Spst9g01760 550 Gene3D - 234 549 IPR012334 -
Spst9g01760 550 FunFam Pectinesterase 234 549 - -
Spst9g01760 550 SMART PMEI_2 47 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01760 Spst-Chr9 19454398 19456880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01760 43 544 Carbohydrate Esterase AT5G09760 66.472 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01760 - - gmx:100802102 872.463