Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01757 ATGGCTCCAGCCACCTCTTCGCCTTCCGCTCAGAGGCATGTAGGCTTCAGCCGCCGCACGCAGGCGCCGTGCCAGCTTCAGGACTCGCGTCGCCAGCTCCACGACGACTCGCCGCCGGCTAAGAAGTACCGGATGATGTCGGACATAATGGCGCGCGCTCGGTATGCGGTGGTGGAGAAAGAGACTTACAGTGACCTGTTGTGCGAGCAATGTGGCTCCGGAGAGCTGTCGGAGGAGCTGCTTCTCTGCGACAAATGCGACAGAGGCTTCCACATGAAATGTGTGAGGCCGATTGTCGTTAGGATTCCGATTGGATCGTGGCTTTGTCCTCAGTGCCAGGGAGGGAAGAGAGTCCGGACTTTCTCGCAGAAGAGGATAATTGATTTCTTCGGGATTCGAAGGAGTTCTTTTGATGCTAACGACAAGCGTTCTTCTCAGGATGCCAAGAAGCGTCGGAAACGTTCAAGACCTCTGGTGTTACATAAGAAAAAAAGGAGATTGTTACCATATGTTCCTACAAAAGATCCAACCCAGAGATTAAAACAGATGGGTTCTCTTGCTTCTGCCTTAACAGCATTAAATATGGAATTCTGTGATCAACTCACATACTTGCCTGGAATGGCTCCTAGATCTGCTAATCGAGCGGCCCTGGAAAACGGTGACATGCAGATTCTTTCCAAGGAAGACATGGAAACCGTAGAACACTGCATTGCCATGTCTAAACGAGGCGAATTTCCTCCCTTTATGGTTGTTTATGATACGCGTCAAGGCTATACTGTTGAGGCTGATGACCTAATCAAGGATATGACAGTTGTTGCTGAATACGCTGGTGATGTGGATTACCTTTACCACCGGGAACGTGATGATTGTGACAGCATGATGACCCTTCTTCTTGGAAGAGAAAGTTCTCAAACTCTTGTTATCTGTGCTGATAAACGTGGAAACATCGCTCGCTTTATCAGTGGCATAAACAATCATACACAGGAAGGTAGGAAAAAGCAAAACTGCAAATGTGTGAGATACAACGTCGATGGTGAATGCAGGGTCTTTTTGGTTGCTACTCGTGATATTTCTAAGGGAGAAAGGCTTTATTATGATTATAATGGTTATGAGTATCAATACCCTACTCATAATTTTGTCTGA 1143 0.4733 MAPATSSPSAQRHVGFSRRTQAPCQLQDSRRQLHDDSPPAKKYRMMSDIMARARYAVVEKETYSDLLCEQCGSGELSEELLLCDKCDRGFHMKCVRPIVVRIPIGSWLCPQCQGGKRVRTFSQKRIIDFFGIRRSSFDANDKRSSQDAKKRRKRSRPLVLHKKKRRLLPYVPTKDPTQRLKQMGSLASALTALNMEFCDQLTYLPGMAPRSANRAALENGDMQILSKEDMETVEHCIAMSKRGEFPPFMVVYDTRQGYTVEADDLIKDMTVVAEYAGDVDYLYHRERDDCDSMMTLLLGRESSQTLVICADKRGNIARFISGINNHTQEGRKKQNCKCVRYNVDGECRVFLVATRDISKGERLYYDYNGYEYQYPTHNFV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01757 380 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 144 378 - -
Spst9g01757 380 SUPERFAMILY FYVE/PHD zinc finger 58 118 IPR011011 -
Spst9g01757 380 SUPERFAMILY SET domain 239 369 IPR046341 -
Spst9g01757 380 SMART PHD_3 67 113 IPR001965 -
Spst9g01757 380 CDD PHD_RSF1 67 112 - -
Spst9g01757 380 Pfam PHD-finger 68 113 IPR019787 -
Spst9g01757 380 Pfam SET domain 291 368 IPR001214 GO:0005515
Spst9g01757 380 ProSiteProfiles SET domain profile. 246 368 IPR001214 GO:0005515
Spst9g01757 380 MobiDBLite consensus disorder prediction 1 39 - -
Spst9g01757 380 FunFam Histone-lysine N-methyltransferase ATXR5 151 380 - -
Spst9g01757 380 ProSiteProfiles Zinc finger PHD-type profile. 65 115 IPR019787 -
Spst9g01757 380 CDD SET_ATXR5_6-like 243 380 - -
Spst9g01757 380 Gene3D SET domain 151 380 IPR046341 -
Spst9g01757 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 126 IPR013083 -
Spst9g01757 380 ProSitePatterns Zinc finger PHD-type signature. 68 112 IPR019786 -
Spst9g01757 380 MobiDBLite consensus disorder prediction 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01757 65 150 C2H2 Transcription Factor Family AT3G01460 32.967 9.48e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst9g01757 SET 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01757 K24406 - gmx:100785817 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01757 9 19431494 19434817 Spst9g01757 9 19431494 19434817 ECH