Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01750 ATGCGATTCATTGACACAATTTCACCCTATGCATTTGGGTTTCATTCTCTCTTCCCATCTATTTCTTTGAGTTTGGGTCCCATTCTCCCTCTGATGTCCTTTTCTCTCTCTAAATTCTATGGAATTCCTCCGGAGAGGCTAAGCCTAGAAGATCCTGTTCTAAGGTACAATATGAGTTTGACAGAAGGCTTAGAGGAGGGTGCAAGCCTCCCAGAGCCTCCTGATCACAATATTGTTGAAATTGATCCTACTAATCGCTACATTAGGTATAAAGACGTTATCGGTCAAGGAGCTTTCAAAACTGTTTACAAGGGATTTGATGAAATTAATGGACTTGAAGTTGCATGGAGCCAAATTCACATCGATGAGATACTACAATCACCTGGTGGCCCAGATAGGTTGCACTCAGAAGTGCATCTCTTGAAGTCACTACAGCACGAGAACATCTTAACTTTCTATAATTCTTGGGTTGATGACAAGCGTAGAACAATGAACTTGATTACTGAGTTATTCACCTCAGGGAACCTCAGACAGTACAGTAAGAAACACAGGAAGGTTGACCTGAAGGCTGTTAAAGGATGGGCAAGGCAAATTTTAAATGGTTTAAACTATCTTCATAGTCACAACCCACCTATTATGCATAGGGACCTGAAGTGCGACAATATATTTATCAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCGACTATATTAAAACAAACTAATGCCAAAAGTGTAATTGGAACCCCGGAGTTCATGGCACCAGAACTGTATGATGAACATTATAATGAATTAGTCGACATATATTCTTTTGGTATGTGCATGCTTGAGTTGGTTACGTCCGAATATCCTTACAGTGAATGCAGAAACTCAGCTCAAATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCTAAACTCAAAAATGCAGAAGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCCCAAAGATTGTCAGCAAAAGAGCTTTTGATGGACCATTTTCTTAAAGTGACTAGTTCGTTGAAGAATCGTCGTCTTCCATTACCAGATATTGTTCTTCCTAAATATGGAGCCTTTGAAAATCGTTGTCTTATGTCAGAAGGTCCTGCTAGTACACGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTACCATTAACCACTTTACTTTATAATTCTATTGATTCTGCTGATCCTATTGATGATGTTTTGCCTTCCCCATGTGTTGAGATACGAAGGTTAAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATGAAAAGTCTGTATCATTAGTCCTCCGAATAGCTGATCAAAGTGGGCGAGCGAGAAATATACATTTCATATTCTACATCAACAGTGATACTGCCATTTCAGTTTCAAGAGAAATGGTTGAACAACTTGAACTGGCTGAGCAGAATGTTAAATTCATAGCAGAGTTAATCGATCTATTGTTGACAACTTTACTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTTGTAATGGTAAATTAACTCATTCAAGTCAACAAAAAAACCCAGAGTTACCAAAATACACGAAAAGCTCAAAAGATTATATCCAAATTGTGCCTCATGATGTAGGTCTCCCAGCTTCACGTGGAAGATCAACAGATAAGGAATACAGTGACAATGTGATTGTTGACAAGGTTTTAACTCATGCAAACACTAAACTTCAAGGAGAGGCAAAGACAGATGACTTTTATTGTGAGACCTCACACACTACTGCAACATCTGACTTCAACTGTAAGCATGCATCTACTGCTTCGTTCATGTCTGCTAAATCAGGATTTACAGAGTTTGACTTGCACAAAGTTAATAGTCAAAGCTCACTTGCATCTGAATTTGAGGCTTCGTCTGATTATAATAGGAGTTTTCCACGTGTGGAAAGCTCTGGTACGATGAAAATCTTTAATTACCCTAATAGTGCTCCCCACTCGAATGAACCTGAGGATGAGTTGAGAATAGAGTTAGAGATGATTGAACACCAATATCAAGAAGCAATTAAAGATTTATCAAAAAGAAGATATCAGGCCATCCTTGAGACTAGGAGGAGGTTGTCACAAAAAATTGCAAGCTTAAAATAA 2163 0.3828 MRFIDTISPYAFGFHSLFPSISLSLGPILPLMSFSLSKFYGIPPERLSLEDPVLRYNMSLTEGLEEGASLPEPPDHNIVEIDPTNRYIRYKDVIGQGAFKTVYKGFDEINGLEVAWSQIHIDEILQSPGGPDRLHSEVHLLKSLQHENILTFYNSWVDDKRRTMNLITELFTSGNLRQYSKKHRKVDLKAVKGWARQILNGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATILKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKLKNAEVKSFIEKCLVPASQRLSAKELLMDHFLKVTSSLKNRRLPLPDIVLPKYGAFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSIDSADPIDDVLPSPCVEIRRLKEGDIFFLKGEQNDEKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSREMVEQLELAEQNVKFIAELIDLLLTTLLPDWKPCVAIDHLVSCNGKLTHSSQQKNPELPKYTKSSKDYIQIVPHDVGLPASRGRSTDKEYSDNVIVDKVLTHANTKLQGEAKTDDFYCETSHTTATSDFNCKHASTASFMSAKSGFTEFDLHKVNSQSSLASEFEASSDYNRSFPRVESSGTMKIFNYPNSAPHSNEPEDELRIELEMIEHQYQEAIKDLSKRRYQAILETRRRLSQKIASLK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01750 720 Coils Coil 676 696 - -
Spst9g01750 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Spst9g01750 720 Gene3D Transferase(Phosphotransferase) domain 1 171 352 - -
Spst9g01750 720 SMART serkin_6 88 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01750 720 Gene3D - 443 526 - -
Spst9g01750 720 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 75 712 - -
Spst9g01750 720 ProSiteProfiles Protein kinase domain profile. 88 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01750 720 CDD STKc_WNK 86 345 - -
Spst9g01750 720 FunFam Probable serine/threonine-protein kinase WNK1 73 169 - -
Spst9g01750 720 FunFam probable serine/threonine-protein kinase WNK9 171 350 - -
Spst9g01750 720 SUPERFAMILY Protein kinase-like (PK-like) 89 391 IPR011009 -
Spst9g01750 720 FunFam Serine/threonine-protein kinase WNK8 443 536 - -
Spst9g01750 720 Gene3D Phosphorylase Kinase; domain 1 73 169 - -
Spst9g01750 720 Pfam Protein kinase domain 91 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01750 Spst-Chr9 19355697 19358905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01750 188 518 MAP Kinase Kinase Kinase AT1G49160 66.767 1.13e-160 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst9g01750 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01750 K08867 - gmx:121175054 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01750 9 19355697 19358905 Spst9g01750 9 19355697 19358905 ECH
Spst3g01337 3 16799497 16802238 Spst9g01750 9 19355697 19358905 PCT