Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01747 ATGGAATGCGAAGGGAAATCGAGGGACAAATTGGTGAGGGTGGTGGGAGCGGGGAAGCTCTGTTATCTTATGAAATCGAAAATCGGAGAGGGTTCATACTCCTTAGTGTGGAGAGCGGAGCAGAGACAAACCGGTGATGACGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGTCTCAAGGCTTGTTTGGATTGCGAGATCAATTTCTTGTCCTCTGTTCACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAGGATGATGGATGTGTTTACCTTGTCCTAGAGTTTTGTGCTGGAGGGAACCTAGCTTCTTATATTCAAAGGCATGGGAAAGTTCAACAACAGACGGCCAGAAAATTCATGCACCAGCTTGGCTCTGGTCTCAAAGTATTACACTCTCACGGCATCATTCACAGAGACTTGAAACCGGAGAACATTTTGCTATCAAGCCACGAGGGTGATGCAATGCTCAAGATAGCAGATTTTGGTCTCTCAAGGACCGTACGCCGAGGTGAATATGCTGAAACAGTTTGTGGTTCTCCATTGTACATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGATGACAAGGCAGACATGTGGAGTGTTGGGGCCATTCTTTTTGAGCTTCTAAATGGTTACCCACCTTTTAATGGCAGGAATAATGTTCAGGTGTTGAAAAACATCAGATCCTGCACCTGTCTTCCATTTTCCCAACTGATTCTTTCAGGATTAGATCCTGACTGTCTTGATATTTGTTCAAAGCTACTACACTTAAATCCAGTGGAGCGACTATCTATTGATGAATTTTATTGGCATAGTTTTCTGCAAAGAAAAATGATGGGAACATGA 864 0.4444 MECEGKSRDKLVRVVGAGKLCYLMKSKIGEGSYSLVWRAEQRQTGDDVAVKQVFLSKLNPRLKACLDCEINFLSSVHHPNIIRLLHFFQDDGCVYLVLEFCAGGNLASYIQRHGKVQQQTARKFMHQLGSGLKVLHSHGIIHRDLKPENILLSSHEGDAMLKIADFGLSRTVRRGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNNVQVLKNIRSCTCLPFSQLILSGLDPDCLDICSKLLHLNPVERLSIDEFYWHSFLQRKMMGT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01747 287 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01747 287 FunFam - 145 286 - -
Spst9g01747 287 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 21 281 IPR045269 GO:0004674|GO:0006914
Spst9g01747 287 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Spst9g01747 287 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01747 287 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Spst9g01747 287 Gene3D Transferase(Phosphotransferase) domain 1 20 286 - -
Spst9g01747 287 FunFam Aurora kinase A 19 104 - -
Spst9g01747 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Spst9g01747 287 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01747 Spst-Chr9 19336362 19338405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01747 22 273 CBL-interacting serine-threonine protein kinases AT2G30360 35.907 2.45e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Spst9g01747 Pkinase 4.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01747 - - lja:Lj1g3v1289070.2 474.552