Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01739 ATGACTGGATTAAACTTGATAGGCACTGAAGGCTCGTCAACTTCAGCTTTGCAGGCTCCCACGCTTCTGCTTCAGCTTCAAGCGTGCGCGTTCTCATCTTCGTCTACTCCTCATCACTCTCGAGACGTGAGGGTTTCGGTGTGGTGGGATTTCAAGAGCTGCACCGTGCCAGATGACGTAGATGCTTCCAAGGTTGGCCCCGCAATCGTGAAGGCCGTGAGGGCCAACGGGGTCAAAGGTCCGCTTCACATTGCCGCTTTCGGCAACGTTAATGTTCTCCCCAAGCCCGACAAGGATGCACTTGCTTCCACCGGCATTCAATTCATCCACATTTTTAACGATTTAAGTGTGCCACTTGAAAACCCATTCCTAGCTGCTGAGCAGCCTACATCTTTACAAAATGTGGAGATCTCTGAACCTTCCTTGGACTTAAAGTTAGGTGCAGTTCCAATGTCAGTTGTAAGACAGATTAAGCATATATTAAATTTACATCCAAAAGGGATCTCCATAACAGATCTTTGTGGGGAGTTGGTAAAATGTGATGTGCCTTTGGATACAAGTTTTTATGGATTTAGAAGCTTTTCATGCTTTCTATTAGCAATGCCACACATACAGCTGCAGCCTGTAGGGAATGATAATTTTTGTGTATGTTTGCCCCCTTCAGAGTCCCCTGATCCTTTTGACAGCAGTGTTGTCCCATCAACATCATCTGTTGTTAAGAACAACGAGAGGGTAGATGCAGACGAGACTCCCTCACCTGCCAACATCCATGCAAGGAGTATGAATGATGACTCAAAATCATTCCAACATGTCCCTTTCCAAACCAACATTGTTGGGGAATGTGTGTATGGTAAATTGGTATTTCCTTCATTAGTCGAAGGACATGAATTTCAGACCCAAAATGACTTGGAGAAATCTTTGCTGTCTAGTGAGAAGGTTGCGGATTTGGCTAATGCACAGCAACTTGAGACTCAACAGTCATCCAAGGAAAACAAATTTTCCAAAACTAAGACAAGTTCATTAAAAGCTAAATCTAAAAGGTCATCTGACATTGGCAATGTTAAATCTGAGGATGCAAGTCATAAAACTATAGAAAAACATACCACTTCAGGGAATCGCTATGCTGGCAATGATAACACAACCATTGAAGACAATGTTGATGACTCTTTGATTGATAGAACACACAGTGGAATTGCTGACACTTATAACAGAAGGCCAACATTCTTTAGTTGGATTAGAAGTTGGTGGCCATTTTGGAAAAGCAATGCAAAATCTGATGATTTAGCTGCTCATCAGAACAAGGTGGAGAGTCACTTGGAGGATTCAAAAGCTGAACCTGAATTGTTTTCTAGTGCCGAGAAAAAGTGGCTGGTGGAGATCCCCTCCCATGGTGTAAATGGTTTTAGATCTGTCTTTATGATCAGAGAATCACAGTTCAAGTTGCCAAATTCATTTGAACATGATGTGAAAAAGCAAAATCAGCCTCATACTAGAGTTTCTGCTGCCGCCACTAAATTGAAATATATAGAGAGGTCTAGAAATGATATATTAGAAGACTTGCATACACTTGTGAATGAGATATTGAGGGACCACTCAAAGGGTTATAACATTATCTTGAGCTCAGATAGTGAACTGTATCTTTCATTGCCGAAAGATAATAACAAGGAATCGACATTGGAGGAATTAGGATCTAGTCAGACATTTGGTTCAGTTGTGGACCGTGTCAATGATGAGCCCAACCCAACCCAAGGCAGTGTGATTTGGAAAATGCAGGGTTTTAGGGTCTTAAACCCTTCCCTCTTGCAGATGGTCTCGAGACATCAAGATTTCGGTGTGGTGGGATTTCGAGAACTGCCTGACGTTTGGGATGTGGCGCCAGCAATCATGAAGGCCGTGAGAGCGAGCGGAATTAAGGGTCCTCTCCAAATCAACGCTTTCGGCGATGTTATGCAGCTCTCAAAATCCAACCGAGAAGCACTTTCTCACACCGGCATCTATTTTACCCACAATCCGGGTTTCTCTTCTTTCATCTTCTTTAACTCCTCTCCTCATTTAACTTTGTTCACTTCGGAAATCATCTCAAGATCATCTCTAATTGGTTCTTTCATCTTTTTTAACTCCTCTCCTCATTTAACTTTGTTCGCTTCAGAAATCATCTCAAGATCATCTCTAATTGGTTCACAGTTAAACTTTTAA 2196 0.4235 MTGLNLIGTEGSSTSALQAPTLLLQLQACAFSSSSTPHHSRDVRVSVWWDFKSCTVPDDVDASKVGPAIVKAVRANGVKGPLHIAAFGNVNVLPKPDKDALASTGIQFIHIFNDLSVPLENPFLAAEQPTSLQNVEISEPSLDLKLGAVPMSVVRQIKHILNLHPKGISITDLCGELVKCDVPLDTSFYGFRSFSCFLLAMPHIQLQPVGNDNFCVCLPPSESPDPFDSSVVPSTSSVVKNNERVDADETPSPANIHARSMNDDSKSFQHVPFQTNIVGECVYGKLVFPSLVEGHEFQTQNDLEKSLLSSEKVADLANAQQLETQQSSKENKFSKTKTSSLKAKSKRSSDIGNVKSEDASHKTIEKHTTSGNRYAGNDNTTIEDNVDDSLIDRTHSGIADTYNRRPTFFSWIRSWWPFWKSNAKSDDLAAHQNKVESHLEDSKAEPELFSSAEKKWLVEIPSHGVNGFRSVFMIRESQFKLPNSFEHDVKKQNQPHTRVSAAATKLKYIERSRNDILEDLHTLVNEILRDHSKGYNIILSSDSELYLSLPKDNNKESTLEELGSSQTFGSVVDRVNDEPNPTQGSVIWKMQGFRVLNPSLLQMVSRHQDFGVVGFRELPDVWDVAPAIMKAVRASGIKGPLQINAFGDVMQLSKSNREALSHTGIYFTHNPGFSSFIFFNSSPHLTLFTSEIISRSSLIGSFIFFNSSPHLTLFASEIISRSSLIGSQLNF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01739 731 CDD PIN_limkain_b1_N_like 44 111 - -
Spst9g01739 731 MobiDBLite consensus disorder prediction 322 381 - -
Spst9g01739 731 PANTHER LIMKAIN B LKAP 33 348 IPR024768 GO:0005777|GO:0010468
Spst9g01739 731 Gene3D - 151 217 IPR041966 -
Spst9g01739 731 MobiDBLite consensus disorder prediction 227 260 - -
Spst9g01739 731 ProSiteProfiles OST-type HTH domain profile. 149 220 IPR025605 -
Spst9g01739 731 MobiDBLite consensus disorder prediction 348 368 - -
Spst9g01739 731 CDD LOTUS 150 204 - -
Spst9g01739 731 Pfam OST-HTH/LOTUS domain 154 211 IPR025605 -
Spst9g01739 731 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01739 Spst-Chr9 19258845 19269905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01739 45 115 C2H2 Transcription Factor Family AT3G62850 33.803 2.71e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01739 - - gmx:102660946 401.364