Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01693 ATGATGGCCCTTCTCCGAAACCACCTCTTCCATTTCTCACGTTCCCCAGCTCCCACGCTTCTGCTTCAGCTTCAAGCGTGCGCGTTCTCATCTTCGTCTACTCCTCATCACTCTCGAGACGTGAGGGTTTCGGTGTGGTGGGATTTCAAGAGCTGCACCGTGCCAGATGACGTAGATGCTTCCAAGGTTGGCCCCGCAATCGTGAAGGCCGTGAGGGCCAACGGCATCAAAGGTCCGCTTCACATTACCGCTTTCGGCAACGTTAATGTTCTCCCCAAGCCCGACATGAATGCACTTGCTTCCACCGGCATTGAATTCATCCACATTTTTAACGGTGGAAAGGATATTCTTGTTGATATCATGTTTTGGGTTATCCAAAATCCTCCACCTGTACATCTCTTTCTGATATCTGGTGATAAAGGTTTTGCTTCCATATTACACCGGTTAAGAATGAATAATTACAATATCTTGCTGGCTAGCCCAAGGAATGCTCCTAGTGTTCTCTTCAGGGCAGCAACTGTAATGTGGCAATGGTCTTCATTGCTTAAGGGAGAAAAACTTATTGGTAAACGATTCAACCATCCTCCTGATGGTCCATTTGGTTCTTGGTACGGAAATCTTAAGGTGCCACTTGAAAACCCATTCCTAGCTGCTGAGCAGCCTACATCTTTACAAAATGTGGAGATCTCTGAACCTTCCTTGGACTTAAAGTTAGGTGCAGTTCCAATGTCAGTTGTAAGACAAATTAAGCATATATTAAATTTACATCCAAAAGGGATCTCCATAACAGATTTTTGTGGGGAGTTGGTAAAATGTGATGTGCCTTTGGATACAAGTTTTTATGGATTTAGAAGCTTTTCATGCTTTCTATTAGCAATGCCACACATACAGCTGCAGCCTTTAGGGAATGATAATTTTTGTGTATGTTTGGCCCCCTCAGAGTCCCCTGATCCTTTTGACAGCAGTGTTGTCCCATCAACATCATCTGTTGTTAAGAACAACGAGAGGGTAGATGCAGACGAGACTCCCTCAACTGCCAACATCCATGCAAGGAGTATGAATGATGACTCAAAATCATTCCAACATGTCCCTTTCCAAACCAACATTGTTGGGGAATGTGTGTATGGTAAATTGGTATTTCCTTCATTAGTCAAAGGACATGAATTTCAGACCCAAAATGACTTGGAGAAATCTTTGCTGTCTAGTGAGAAGGTTGCGGATCTGGCTAATGCACAGCAACTTGAGATTCAACAGCCACCCAAGAAAAACAAATTTTCCAAAAGTAAGACAAGTTCATTAAAAGCTAAATCTAAAAGGTCATCTGACATTGGCAATGTTAAATCTGAGGATGCAAGTCATAAAACTATAGAAAAACATACCACTTCAGGGAATCCCTATGCTGGCAATGATAACACAACCATGGAAGACAATGGTACTGGAAATTATGAATTGGGAAATTTTAAAGCAAGGAACAAACATGAGAGTCCAACTAGAAAGGTGGCTGCCGAAGTTTGTTTCAGCCCATATTCTTCACCAGTTGATGACTCTCTGATTGATAGAACACACAGTGGAATTGCTGACACTTATAACAGAAGGCCAACATTCTTTAGTTGGATTAGAAGTTGGTGTCCATTTTGGAAAAGCAATGCAAAATCTGATGATTTAGCTGCTCAGCAGAACAAGGTGGAGAGTCACTTGGAGGATTCAAAAGCTGAAGTGGACCAGACTGTTAGTCAATTTGAAGAACCCGCCTTATCAGAGCTGGACCAGAATGTTGTTCATTATCGGCAGCCTGAATTGTTTTCTAGTGGTTCATTTTGGAATGATTTGGAATCTTTTATTTTCATGCCCAAAGGATCACTTCTTATTTCGCAGTCAAAAAACAGGGAGGATGACACATAA 1902 0.4211 MMALLRNHLFHFSRSPAPTLLLQLQACAFSSSSTPHHSRDVRVSVWWDFKSCTVPDDVDASKVGPAIVKAVRANGIKGPLHITAFGNVNVLPKPDMNALASTGIEFIHIFNGGKDILVDIMFWVIQNPPPVHLFLISGDKGFASILHRLRMNNYNILLASPRNAPSVLFRAATVMWQWSSLLKGEKLIGKRFNHPPDGPFGSWYGNLKVPLENPFLAAEQPTSLQNVEISEPSLDLKLGAVPMSVVRQIKHILNLHPKGISITDFCGELVKCDVPLDTSFYGFRSFSCFLLAMPHIQLQPLGNDNFCVCLAPSESPDPFDSSVVPSTSSVVKNNERVDADETPSTANIHARSMNDDSKSFQHVPFQTNIVGECVYGKLVFPSLVKGHEFQTQNDLEKSLLSSEKVADLANAQQLEIQQPPKKNKFSKSKTSSLKAKSKRSSDIGNVKSEDASHKTIEKHTTSGNPYAGNDNTTMEDNGTGNYELGNFKARNKHESPTRKVAAEVCFSPYSSPVDDSLIDRTHSGIADTYNRRPTFFSWIRSWCPFWKSNAKSDDLAAQQNKVESHLEDSKAEVDQTVSQFEEPALSELDQNVVHYRQPELFSSGSFWNDLESFIFMPKGSLLISQSKNREDDT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01693 633 CDD LOTUS 242 296 - -
Spst9g01693 633 CDD PIN_limkain_b1_N_like 42 161 - -
Spst9g01693 633 MobiDBLite consensus disorder prediction 440 457 - -
Spst9g01693 633 Pfam OST-HTH/LOTUS domain 246 299 IPR025605 -
Spst9g01693 633 MobiDBLite consensus disorder prediction 458 480 - -
Spst9g01693 633 MobiDBLite consensus disorder prediction 413 481 - -
Spst9g01693 633 Pfam NYN domain 42 173 IPR021139 GO:0004540
Spst9g01693 633 Gene3D - 243 310 IPR041966 -
Spst9g01693 633 ProSiteProfiles OST-type HTH domain profile. 241 312 IPR025605 -
Spst9g01693 633 PANTHER LIMKAIN B LKAP 31 437 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01693 Spst-Chr9 17342712 17345644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01693 41 184 C2H2 Transcription Factor Family AT5G61190 42.282 1.08e-31 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01693 9 17342712 17345644 Spst9g01693 9 17342712 17345644 ECH