Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01677 ATGAAAGCCCTGTACAGAAGCTCTCTCTTTCTTGTCTTTCTCATTTTCTACTTCACCGTCCACTTTCTAGCCAGAGCTTCTTCTGCACTTCCCACCAGAGACCCAACCCAGCAACTCCTTAGCTTCAAAGCCTCTCTCCCCAACCCATCCCTCCTCCCCAACTGGCTCCCCAACCAAACTCCCTGTTCCTTCACCGGTGTCACCTGCAACCAGACCCACCTCACTTCCATAGACCTCAGCTCCGTCCCTCTCAGCACCAACCTTTCCATTGTGGCCACCTACCTCCTCACCCTCGACCACCTCCAATCCCTCTCCCTCAAATCCACCAACCTCACTGGTCCTGCCACCGTTCCTCTCTCGCATTCCAAGTGTGCCTCCTCCCTAACCACCATAGATCTGTCCCAGAACATCCTCTCCGGCTCCCTCAACGACATGTCGTTTTTAGCTTCCTGTTCAAACCTTCAATCTCTCAACCTGTCTAGTAACTTCCTGGAATTCGACTCCTCACACTGGAAACTCAACCTCCGTGTCGCCGACCTCTCCTACAACAAGATTTCTGGTCCTGGTGTTGTGCAGTGGCTTCTCAACCCCGATGTCGAACACCTGGCGCTCAAAGGTAACAAAATCACAGGAGAAACGGATTTCTCGGGTTCTACTTCTCTGCAGTACTTGGACCTTTCCTCCAACAACTTCTCTGTGGCTATTCCTTCCTTGGGCGACTGTTCCTCACTGGAATACTTGGACCTCTCTGCCAACAAATATTTTGGCGACATTGCAAGCACTCTTTCCCCTTGCAAGAGACTTGTCTACCTTAATGTCTCCAGTAACCAGTTCTTCGGTTCGGTTCCTTCCCTCCCCCTGGGTTCTCTCCAGTTTGTGTACCTCGCAGCCAACAACTTTCGTGGCCAGATTCCTCCTGCACTCGCAGACCTCTGCTCCACTCTCCTCCAGCTGGATCTCTCTTCCAACACTCTCACTGGTGTCCTCCCACGCGCCTTTGGTGCCTGCACTTCGCTCCAATCCTTAGACATCTCGACCAACCTCTTCTCCGGGGCGATGCCGATGGAGGTTCTGACTGAAATGAGCAGCTTGCAGGAGCTTGCGGTGGCATTCAACAAATTCGGCGGTCCTTTCCCCACGTCGCTGTCGAGGCTTTCTAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGGCCAATCCCTGGAACGCTGTGCGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAATCAGTTCACGGGTTTTATTCCGCCCACGCTCAGCAACTGTTCCAACCTCGTTGCCTTGGACTTGAGCTTCAACTTCCTCTCGGGGACCATCCCTCCAAGTCTGGGGTCTCTCTCCAAGCTTCGAGACTTGATGATCTGGCTCAACCAGCTCCATGGAGAGATTCCTCAGGAGCTGATGTATCTCAATAGCCTCGAGAATCTTATCCTGGATTTCAACGACTTGAGTGGGAACATTCCCTCCGGCCTGGTTAACTGCACCAAGCTCAATTGGATCTCACTCTCCAACAACAGGCTCAGTGGCCAGATACCCGCCTGGATTGGGAAGCTTTCCAATCTGGTCATACTCAAGCTCAGCAATAATTCCTTCTCTGGCAGGATTCCGGCCGAGCTTGGCGATTGCACTAGCCTGATATGGTTGGATCTGAATACTAACTCACTCACTGGGCCCATTCCGCCTGAGCTGTTCAAGCAATCAGGGAAGATAGCTGTGAATTTCATCAGTGGGAAGACATATGTGTATATAAAGAACGATGGGAGTAAAGAGTGCCATGGAGCTGGGAACTTGCTGGAGTTTGCGGGGATCAGTCAGAAGCAGCTGAACAGGATTTCTACCAAGAATCCCTGCAATTTCACTAGGGTTTATGGGGGTAAGTTGCAGCCAACGTTTAACCATAATGGTTCTATGATATTTTTGGATATATCGCACAACATGTTGTCAGGGAGTATTCCGAAAGAAATTGGGGCCATGTACTATTTGACCATTCTCAATCTGGGTCACAATAATGTATCTGGGAGCATTCCTCAGGAGCTTGGGAAGATAAAGAATCTCAACATTCTTGATCTCTCGAACAATAGACTGGAAGGACAAATCCCGCAGACCCTTACCGGGCTTTCCTTGCTCACTGAGATTGACTTGTCCAACAACATGCTTTCGGGGACTATTCCTGAGACGGGTCAGTTTGATACTTTCCCTGCGGCGAAGTTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTTGCCCCGTGTGGGTCCGACCCGGCAAATAGTGGGAGTGCACAGCATATGAAGTCTCACAGGAGGCAGGCTTCTCTGGCGGGGAGTGTTGCAATGGGGTTGCTGTTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGCGGAAGAAGAAGGAGGCTGCTCTTGAGGCCTACGTGGACGGTCTTTCGCATTCGGGTCCGGCCAATGTGAGCTGGAAGCACACCAGTACCCGTGAAGCGCTTAGCATAAATCTTGCAACGTTTGAGAAGCCCCTTCGGAAGCTTACTTTCGCCGACCTTCTTGATGCCACCAATGGCTTTCACAACGACAGTCTCATTGGCTCTGGTGGGTTTGGGGACGTGTACAAGGCTCAGTTGAAGGACGGAAGTGTTGTGGCCATCAAGAAGCTAATTCATGTCAGCGGACAAGGGGACAGAGAGTTCACTGCTGAAATGGAGACCATTGGGAAAATCAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAGGTTGGGGAGGAGAGGCTTTTGGTTTATGAGTATATGAAATACGGGAGCTTAGAGGATGTTCTGCATGATCAGAAGAAAGCTGGGATCAAGCTGAACTGGTCGATTAGGAGGAAAATTGCAATTGGAGCTGCCAGGGGATTGGCTTTTCTTCACCACAATTGTATCCCTCACATCATTCATAGAGACATGAAGTCGAGCAATGTGTTGCTTGATGAAAACCTGGAAGCCAGGGTGTCTGATTTTGGGATGGCTAGGCTTATGAGTGCTATGGATACTCATTTGAGTGTGAGCACACTGGCGGGCACCCCAGGGTATGTCCCTCCCGAGTACTATCAGAGCTTCAGATGCTCCACCAAAGGTGATGTCTACAGTTACGGAGTAGTTTTGCTTGAGCTGCTAACTGGGAAAAGGCCAACGGACTCGGCTGATTTTGGTGACAATAATCTTGTTGGATGGGTTAAACAACACGCGAAGCTGAAAATAAGTGATATTTTTGACCCGGAGCTCATGAAGGAAGACCCTAATCTGGAGATGGAGCTTTTGCAACACCTTAAGATTGCGTGCTCCTGCTTGGATGATCGGCAATGGAAGCGTCCCACGATGATTCAAGTAATGGCAATGTTCAAGGAGATTCAGGCGGGATCTGGAATCGATTCTCAGTCAACGATAGCCACCGAAGATGAAGGTTTCAATGCCATAGAAATGGTGGAGATGAGCATTAAAGAAGCCCCTGAATTGAGCAAGCATTAA 3564 0.4989 MKALYRSSLFLVFLIFYFTVHFLARASSALPTRDPTQQLLSFKASLPNPSLLPNWLPNQTPCSFTGVTCNQTHLTSIDLSSVPLSTNLSIVATYLLTLDHLQSLSLKSTNLTGPATVPLSHSKCASSLTTIDLSQNILSGSLNDMSFLASCSNLQSLNLSSNFLEFDSSHWKLNLRVADLSYNKISGPGVVQWLLNPDVEHLALKGNKITGETDFSGSTSLQYLDLSSNNFSVAIPSLGDCSSLEYLDLSANKYFGDIASTLSPCKRLVYLNVSSNQFFGSVPSLPLGSLQFVYLAANNFRGQIPPALADLCSTLLQLDLSSNTLTGVLPRAFGACTSLQSLDISTNLFSGAMPMEVLTEMSSLQELAVAFNKFGGPFPTSLSRLSSLELLDLSSNNFSGPIPGTLCGDAGNNLKELYLQNNQFTGFIPPTLSNCSNLVALDLSFNFLSGTIPPSLGSLSKLRDLMIWLNQLHGEIPQELMYLNSLENLILDFNDLSGNIPSGLVNCTKLNWISLSNNRLSGQIPAWIGKLSNLVILKLSNNSFSGRIPAELGDCTSLIWLDLNTNSLTGPIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQKQLNRISTKNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIGAMYYLTILNLGHNNVSGSIPQELGKIKNLNILDLSNNRLEGQIPQTLTGLSLLTEIDLSNNMLSGTIPETGQFDTFPAAKFQNNSGLCGVPLAPCGSDPANSGSAQHMKSHRRQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEAALEAYVDGLSHSGPANVSWKHTSTREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWSIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDPELMKEDPNLEMELLQHLKIACSCLDDRQWKRPTMIQVMAMFKEIQAGSGIDSQSTIATEDEGFNAIEMVEMSIKEAPELSKH 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01677 1187 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 411 500 - -
Spst9g01677 1187 Gene3D - 586 646 - -
Spst9g01677 1187 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 642 764 - -
Spst9g01677 1187 PRINTS Leucine-rich repeat signature 315 328 - -
Spst9g01677 1187 PRINTS Leucine-rich repeat signature 695 708 - -
Spst9g01677 1187 ProSiteProfiles Leucine-rich repeat profile. 220 242 IPR001611 GO:0005515
Spst9g01677 1187 ProSitePatterns Protein kinases ATP-binding region signature. 880 903 IPR017441 GO:0005524
Spst9g01677 1187 SUPERFAMILY L domain-like 34 283 - -
Spst9g01677 1187 CDD STKc_IRAK 880 1149 - -
Spst9g01677 1187 Gene3D Ribonuclease Inhibitor 39 764 IPR032675 -
Spst9g01677 1187 Pfam Brassinosteroid receptor island domain 581 645 IPR045381 -
Spst9g01677 1187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Spst9g01677 1187 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 287 1145 - -
Spst9g01677 1187 SUPERFAMILY Protein kinase-like (PK-like) 860 1151 IPR011009 -
Spst9g01677 1187 SMART LRR_typ_2 385 409 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 312 335 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 413 435 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 287 311 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 719 742 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 556 579 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 219 241 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 695 718 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 531 555 IPR003591 -
Spst9g01677 1187 SMART LRR_typ_2 483 507 IPR003591 -
Spst9g01677 1187 SUPERFAMILY L domain-like 246 752 - -
Spst9g01677 1187 Pfam Leucine Rich repeats (2 copies) 219 262 IPR025875 -
Spst9g01677 1187 Gene3D Transferase(Phosphotransferase) domain 1 950 1151 - -
Spst9g01677 1187 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Spst9g01677 1187 Pfam Leucine rich repeat 290 348 IPR001611 GO:0005515
Spst9g01677 1187 Pfam Leucine rich repeat 674 732 IPR001611 GO:0005515
Spst9g01677 1187 Pfam Protein kinase domain 874 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01677 1187 Gene3D Phosphorylase Kinase; domain 1 835 949 - -
Spst9g01677 1187 ProSiteProfiles Protein kinase domain profile. 874 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01677 1187 SMART serkin_6 874 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01677 1187 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 172 410 - -
Spst9g01677 1187 FunFam Leucine-rich repeat receptor protein kinase EMS1 501 591 - -
Spst9g01677 1187 Pfam Leucine Rich Repeat 413 435 IPR001611 GO:0005515
Spst9g01677 1187 Pfam Leucine Rich Repeat 437 459 IPR001611 GO:0005515
Spst9g01677 1187 FunFam serine/threonine-protein kinase BRI1-like 2 835 949 - -
Spst9g01677 1187 FunFam Serine/threonine-protein kinase BRI1-like 1 588 645 - -
Spst9g01677 1187 FunFam Brassinosteroid LRR receptor kinase 950 1151 - -
Spst9g01677 1187 Pfam Leucine rich repeat N-terminal domain 37 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01677 Spst-Chr9 17027501 17031064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01677 37 1183 Receptor kinase-like Gene Family AT4G39400 70.077 0.0 1560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Spst9g01677 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01677 K13415 - gmx:100499629 2032.68