Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01676 ATGATGTCAACAACGTCTCAAACTAGTGTTAACCATAGCTTGTTTGACGAGCAAGATCAGATCCCTACCCAGATGGGGTTCACTAATCCTTTTCCACCAAACCAGGCCTTTCCTCCTTTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCAATAGTTCCTTCACTTTCATCTGAACCTGCTTCTTCTGCAGCGAATTTTGCTGAAACCCTATTTTCAACCGCTGTTCAAAGACCACGAGAAGATCTCACTTCAAGTTTGGTAGGCGGAGGAGGAGAACACCTTTCCTTGAACAGATCGAGAGTAAATCCGTGGGCATGGGAAGAAGTAACCAATTGCTTGATGAGTAAAAGAATGGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATAAAGGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACGTATGAAGGGAGACATGTGCACTCGCCATCAAATGAACTTGAAGACTCACAATCTACTTCTGAACTTAGTAACTTCTTGTGGTAG 711 0.4515 MMSTTSQTSVNHSLFDEQDQIPTQMGFTNPFPPNQAFPPLGCHQSLKSISAIVPSLSSEPASSAANFAETLFSTAVQRPREDLTSSLVGGGGEHLSLNRSRVNPWAWEEVTNCLMSKRMGGDDNHHLGVSAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSTSELSNFLW 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01676 236 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01676 236 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01676 236 MobiDBLite consensus disorder prediction 216 236 - -
Spst9g01676 236 MobiDBLite consensus disorder prediction 221 236 - -
Spst9g01676 236 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g01676 236 FunFam WRKY transcription factor 57 145 219 - -
Spst9g01676 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 221 IPR044810 GO:0003700
Spst9g01676 236 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01676 236 SUPERFAMILY WRKY DNA-binding domain 151 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01676 Spst-Chr9 17008827 17011627 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01676 129 236 WRKY Transcription Factor Family AT4G39410 82.301 2.09e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g01676 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01676 - - gmx:100127389 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01676 9 17008827 17011627 Spst9g01676 9 17008827 17011627 ECH