Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01671 ATGGACTTGGCTGCGAAGCTTCATCACTTAGACCTCACCGGCGCAGTCATTTTGGATGCGCGAAAGCCCTCCGTGCTACGCCACCTTCCGCCACGCGTCAACACCAGAGCCAACATCAACAACACTAACGTCAATATCAGTCTAATTTACACCAACCGGTTCTCGAGCCCATTGCGGCCCAATTCCGCTTCTTCATCGGGCCTAACAACCGTAACCGTCGACGACGACATCGAGTCGCTCTTCTCCGAAACCTCCTCGGTGGACCCGCGGCGCGTGCGGAAGCTGCAGAGTAGCGGCGCGTCGGGCGTGTCGTCGGGGGTGAAGCTGGAAAACGTGGGGAAGGCATATAAGGGCGCGACGGTGTTGAAGGACGTGAGTTGGGAGGTGAAGAAGGGGGAGAAGGTGGGTTTGGTTGGCGTGAACGGCGCCGGCAAGACGACGCAGATGAGGATTATCGCAGGATTGGAGGAGCCGGATTACGGGAACGTGATAAAGGCGAAGCCGAACATGAAAATCGCGTTTCTGAATCAGGAGTTCGAGGTGTCGCTGAGCAGGACGGTGAGGGAGGAGTACATGAGCGCGTTCAAGGAGGAAATGGAGGTGGCGGGGAAGTTGGAGAGGGTGCAGAAGGCGCTCGAGGGTGCTGTCAACGATTTGGAATTGATGGGAAGGCTTTTGGATGAGTTTGATTTGCTTCAGCGGAGGGCTCAAGCTGTGGACCTTGATGAGGTTGATGCGAAAATAAATAAGTTGGTGCCTGAACTTGGCTTTGCTCCTGAGGATTCCGATAGGTTGGTTGCGTCTTTCAGTGGAGGCTGGCAGATGAGAATGTGTCTTGGAAAGATTCTACTTCAGGATCCTGATTTGTTGCTGTTAGATGAGCCCACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAGGAGTATCTTAAACAGCAGGATGTGCCGATGGTTATCATTTCCCATGACCGAGCTTTCCTTGACCAACTGTGCACAAAGATTGTGGAAACTGACATGGGTGTGTCAAGGACATTTGAGGGAAATTATTCGCAGTATATAATATCAAAAGCAACATGGATTGAAGCACAGTATGCTGCTTGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAGAGACTTGATTAGTAGATTAGGAGCTGGAGCAAATTCTGGCCGTGCTTCCTCTGCTGAGAAGAAGCTGGAGAGACTTCAGGAAGAGGAACTGGTGGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGCGGAAGGAGTGGAAGATCTGTTGTAACGATTAGGAACTTGGAATTTGGCTTTGAGGATAAGCCACTTTTCAAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTTCTTTACTGAAATTGATTATGGGTTTGGAAAAGCCAACTGGGGGTGAAGTTTTGCTTGGGGAGCATAATGTGTTACCCAACTATTTTGAGCAGAATCAGGCTGAAGCACTTGATCTGGACAAGACAGTGCTTGAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGACCGGAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGACTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTCTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAGGAAATGCTTGAGGAAGCAATAAATGAATACGAGGGCACTGTTATCACAGTATCTCATGACAGATACTTCATAAAGCAAATAGTGAACAGGGTGATAGAAATTAAAGATGGCACTATACAGGATTATGCAGGTGATTACAATTATTATTTGGAGAAGAATCTTGATGCGAGGGAAAGAGAACTTGAACGCGAGGCAGAACTTGATAGCAAAGCTCCTAAAGTGAAAGCCAAATCCAAGATGTCCAAGGCTGAGAAAGATGCAAGAAAGAAGCAAAAGATGCAGGCCTTCCAGGCAGCAAAACAGAAGTCAAAAGGTGTGAAAAATGCGAAGAGATGGAATTGA 2106 0.4729 MDLAAKLHHLDLTGAVILDARKPSVLRHLPPRVNTRANINNTNVNISLIYTNRFSSPLRPNSASSSGLTTVTVDDDIESLFSETSSVDPRRVRKLQSSGASGVSSGVKLENVGKAYKGATVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDYGNVIKAKPNMKIAFLNQEFEVSLSRTVREEYMSAFKEEMEVAGKLERVQKALEGAVNDLELMGRLLDEFDLLQRRAQAVDLDEVDAKINKLVPELGFAPEDSDRLVASFSGGWQMRMCLGKILLQDPDLLLLDEPTNHLDLDTIEWLEEYLKQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYIISKATWIEAQYAAWEKQQKEIEQTRDLISRLGAGANSGRASSAEKKLERLQEEELVEKPFERKQMKIRFPERGRSGRSVVTIRNLEFGFEDKPLFKKANLTIERGEKIAIIGPNGCGKSSLLKLIMGLEKPTGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNYYLEKNLDARERELEREAELDSKAPKVKAKSKMSKAEKDARKKQKMQAFQAAKQKSKGVKNAKRWN 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01671 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 639 IPR027417 -
Spst9g01671 701 MobiDBLite consensus disorder prediction 651 701 - -
Spst9g01671 701 Pfam ABC transporter 450 581 IPR003439 GO:0005524
Spst9g01671 701 Gene3D - 396 665 IPR027417 -
Spst9g01671 701 FunFam ABC transporter ATP-binding protein 394 663 - -
Spst9g01671 701 CDD ABCF_EF-3 108 337 - -
Spst9g01671 701 CDD ABCF_EF-3 434 626 - -
Spst9g01671 701 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 106 692 - -
Spst9g01671 701 FunFam Putative ABC transporter ATP-binding component 106 392 - -
Spst9g01671 701 Coils Coil 661 681 - -
Spst9g01671 701 Pfam ABC transporter 122 297 IPR003439 GO:0005524
Spst9g01671 701 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Spst9g01671 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 342 IPR027417 -
Spst9g01671 701 Gene3D - 104 388 IPR027417 -
Spst9g01671 701 Pfam ABC transporter 336 423 IPR032781 -
Spst9g01671 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 434 649 IPR003439 GO:0005524
Spst9g01671 701 ProSitePatterns ABC transporters family signature. 269 283 IPR017871 GO:0005524|GO:0016887
Spst9g01671 701 SMART AAA_5 131 346 IPR003593 GO:0016887
Spst9g01671 701 SMART AAA_5 458 626 IPR003593 GO:0016887
Spst9g01671 701 MobiDBLite consensus disorder prediction 651 681 - -
Spst9g01671 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 365 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01671 Spst-Chr9 16962764 16967894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01671 431 651 Calmodulin-binding Proteins AT2G36910 25.911 2.89e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01671 - - gmx:100796907 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01671 9 16962764 16967894 Spst9g01671 9 16962764 16967894 ECH