Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01651 ATGAATTCCCCACCCAACTTCTTCTTCCTTCTTCTCTTCTTCACTATCTTCACAACTTCTTCCTCTGCCTCACTCCCGGAGCTCCGATCTCTCATGGAATTCAAGAAGGGGATAACTAAAGATCCGCAGAAGCTGCTAGAATCGTGGACGCCGGCGGCGGTGGCCGAGGCCACTGCCGCCTGTCCGTCTTCCTGGCAGGGCATTGTGTGTGATGAGGAGTCTGGAAACGTTACCGGAATCGTCCTCGACCGCCTCCATCTCGGCGGGGAGCTCAAGTTCCATACTCTCCTTGACCTCAAGATGCTCAGAAACCTCTCGCTCTCGGGAAATGAGTTCACCGGAAGGTTGCCTCCCTCCCTGGGGTCTCTGTCTTCGCTCCAGCATTTGGATCTTTCACAGAACAAGTTCTACGGCCCTATCCCTGCGCGGATCAACGACCTTTGGGGTCTGAATTACCTCAATTTGTCCAACAACCACTTCAAGGGTGGCTTCCCCAGCGGCCTCTCCAACCTTCAGCAGCTTCGAGTTCTCGATTTGCATGACAACGCTCTCTGGGCCGAAATTGGGGACGTCCTCTCCACGCTCCGGAATGTGGAGCGCGTCGATTTGAGTTTTAACCAGTTCTTTGGCGGACTTTCCCTCACAGTGGAGAATGTTTCTGGGTTGGCCAACACAGTGCATTTTCTTAACCTCAGTTACAACAACTTGAACGGTCACTTCTTCAACAACTCCACTATTGGCTTGTTTCGCAACTTGGAGGTTTTGGACTTGAGTAATAACTCCATCACCGGGGTGCTTCCTTCTTTTGCCTCATTACCCGCACTTCGCGTTCTTAGGCTTCCCCGTAATCAATTGTTTGGTTCCGTGCCCGAGGAGTTGTTGCAGACTACCGTGCCGCTGGAAGAATTGGATCTTAGCTTCAACGGGTTTACCGGCTCAATCGCTGTAATCAACTCTACAAGTTTAAATATTTTGAATCTTTCATCCAATAGTTTATCAGGCTTCTTGCCAACCTCTTTGAAAAGATGTACTGTCATTGACGTTAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCCCGTTGGAGGTTATTAATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTCCTACATCAGGAGTCTATTCAAAATTGTCTACCATTGATTTAAGTTTAAATGAACTTACAGGATCCGTTCCACGAGGTTTAGTTACTTCATCATCAGTGACAAGACTGAATCTTTCTGGAAATCAACTTACAGGGCAACTTCTGCTTCAAGGTTCAGGAGCAAGTGAATTACTCCTTATGCCTCCTTATCAACTAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGCCTTGCCTTCTGAAATAGATAGGATGAGTGTGCTGAAACTGCTGAATCTGGCTAGGAATGACTTTTCTGGATCGCTGCCAAATGAATTGAACAAACTTCTTTATTTGGAGTACCTTGATTTGTCTAACAACAAATTTACTGGAAATATTCCTGATAAGCTTTCATCCAGTTTAGCTGTATTTAACGTCTCCAATAATGATCTATCTGGCCGAGTTCCTGAAAATTTGCGGCAGTTCCCTCCTTCATCCTTTCGCCCTGGAAATGGAAAGTTAATGTTACCAAATGATTCTCCTGAGACTTCTTCGGTGCCTGATAACATTCCAGATAAGGTTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCCTCAGTGGGCGCTGCTGTTATGATTGCTTTTGTTTTATTGGCTTATCATCGAACACAGCTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGTCAAAATACCAGAAGAGATGCCAAGTTAGGAGGACTTTCGAGGCCTTCCCTCTTCAAGTTCAATACAAATGTTCAACCCCCAACAACTTCATTGAGCTTTTCAAATGATCACCTGCTGACTTCCAATTCGAGGTCACTCTCTGGTGGACAATCAGAATTTATAACTGAAATCTCTGAGCATGGCTTAACTCATGGAATGGTGGCCACTAGTTCAGCATCTGTGAATCCCAATTTGATGGATAACCATCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCATTGTCATCCTCACCCCGTTTCCTAGAGGCTTGTGAAAAGCCAGTCATGTTGGATGTTTACTCGCCAGATCGGTTGGCTGGGGAATTGTTTTTTCTGGATTCTTCCATAGCATTCACTGCAGAGGAATTATCTAGAGCCCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATATAAAGCAACTTTGGACAGTGGTCATATGTTGACTGTAAAATGGTTACGGGTGGGATTGGTGAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTGCTAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGATTATATACACGGGGACAGCTTGGCCCTTCATCTCTATGAGAGCACACCCCGGAGGTACTCCCCATTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTTGCACGATGTCTTCTATATCTCCATGACCGAGGACTGCCCCATGGAAATCTGAAGCCCACGAATATAGTGCTAGCAGGCCCTGATTTCAACGCTCGTCTTACTGACTATGGTCTACACCGGCTGATGACACTGGCTGGAATTGCAGAGCAGATACTCAATCTTGGAGCACTTGGATACCGTGCTCCGGAACTTGCTACTGCTTCCAAACCTGTTCCATCCTTTAAGGCAGATGTGTATGCTCTTGGTGTGATACTAATGGAATTGTTGACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAGTCAGGTGCCGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCCAAAGAGATGGATGAACTTCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCCGTTTGA 3117 0.4536 MNSPPNFFFLLLFFTIFTTSSSASLPELRSLMEFKKGITKDPQKLLESWTPAAVAEATAACPSSWQGIVCDEESGNVTGIVLDRLHLGGELKFHTLLDLKMLRNLSLSGNEFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNYLNLSNNHFKGGFPSGLSNLQQLRVLDLHDNALWAEIGDVLSTLRNVERVDLSFNQFFGGLSLTVENVSGLANTVHFLNLSYNNLNGHFFNNSTIGLFRNLEVLDLSNNSITGVLPSFASLPALRVLRLPRNQLFGSVPEELLQTTVPLEELDLSFNGFTGSIAVINSTSLNILNLSSNSLSGFLPTSLKRCTVIDVSRNMLSGDISVIQNWEAPLEVINLSSNKLSGSLPPTSGVYSKLSTIDLSLNELTGSVPRGLVTSSSVTRLNLSGNQLTGQLLLQGSGASELLLMPPYQLMEYLDVSNNSLEGALPSEIDRMSVLKLLNLARNDFSGSLPNELNKLLYLEYLDLSNNKFTGNIPDKLSSSLAVFNVSNNDLSGRVPENLRQFPPSSFRPGNGKLMLPNDSPETSSVPDNIPDKVRHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDAKLGGLSRPSLFKFNTNVQPPTTSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTHGMVATSSASVNPNLMDNHPTSSGRKSSPGSPLSSSPRFLEACEKPVMLDVYSPDRLAGELFFLDSSIAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDSLALHLYESTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTLAGIAEQILNLGALGYRAPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01651 1038 FunFam Pollen receptor-like kinase 1 836 1038 - -
Spst9g01651 1038 SUPERFAMILY L domain-like 61 357 - -
Spst9g01651 1038 ProSiteProfiles Protein kinase domain profile. 758 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01651 1038 SMART LRR_typ_2 123 147 IPR003591 -
Spst9g01651 1038 SMART LRR_typ_2 272 296 IPR003591 -
Spst9g01651 1038 SMART LRR_typ_2 249 271 IPR003591 -
Spst9g01651 1038 SMART LRR_typ_2 99 122 IPR003591 -
Spst9g01651 1038 SMART LRR_typ_2 493 517 IPR003591 -
Spst9g01651 1038 SMART LRR_typ_2 171 195 IPR003591 -
Spst9g01651 1038 Gene3D Ribonuclease Inhibitor 188 297 IPR032675 -
Spst9g01651 1038 MobiDBLite consensus disorder prediction 540 567 - -
Spst9g01651 1038 MobiDBLite consensus disorder prediction 621 641 - -
Spst9g01651 1038 Pfam Protein kinase domain 762 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01651 1038 Gene3D Transferase(Phosphotransferase) domain 1 837 1038 - -
Spst9g01651 1038 MobiDBLite consensus disorder prediction 690 718 - -
Spst9g01651 1038 FunFam Nuclear pore complex protein NUP107 24 190 - -
Spst9g01651 1038 Gene3D Ribonuclease Inhibitor 446 545 IPR032675 -
Spst9g01651 1038 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 442 532 - -
Spst9g01651 1038 Gene3D Phosphorylase Kinase; domain 1 739 835 - -
Spst9g01651 1038 Pfam Leucine rich repeat N-terminal domain 27 71 IPR013210 -
Spst9g01651 1038 ProSiteProfiles Leucine-rich repeat profile. 251 273 IPR001611 GO:0005515
Spst9g01651 1038 Pfam Leucine Rich repeats (2 copies) 251 283 IPR025875 -
Spst9g01651 1038 MobiDBLite consensus disorder prediction 690 716 - -
Spst9g01651 1038 Gene3D Ribonuclease Inhibitor 298 434 IPR032675 -
Spst9g01651 1038 FunFam Leucine-rich repeat receptor-like protein kinase 743 835 - -
Spst9g01651 1038 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
Spst9g01651 1038 SUPERFAMILY Protein kinase-like (PK-like) 761 1033 IPR011009 -
Spst9g01651 1038 PANTHER OS07G0626500 PROTEIN 373 1036 - -
Spst9g01651 1038 SUPERFAMILY RNI-like 320 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01651 Spst-Chr9 16708141 16713077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01651 9 1029 Receptor kinase-like Gene Family AT5G01890 25.376 4.34e-62 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst9g01651 Pkinase 8.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01651 - - gmx:100802768 1777.68