Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01650 ATGAAAGTGGTCCAATTGGTCAAAGACAACTCAGAGAACCAAACAATAAATGTTACACCTTTTATTGATTTGGTCCAGGGTCAGCTTGCGGTTTCCACACGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCCTCTCAAATGGGAAGAAGACATATGTTAGGCCCTCCTGGAACCCTAAATACCATCACCCCTTGTGCAGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCTTATTTCTCTCCCCATGAGCCCCAAAAATTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAGAGAGCTGATGCAGCAAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTACAACAGCAAGTTCAATCTTTACAAGCTGAACTTAATGTAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAAGCTCACATGATACACTCCTCTCATGTTGCAATGCTTCCTTCATCTGGGGCTGTTTCAATTGCTGCTCCACCTCCACCACCTCCTCCTCCACCACCACCTCCACCTCCTTCTCTTCCTCAAACTTCTTCCTCTTCTTCCATGTACATCCAACAGAGGGATCCCACCACTTACACAATTTCAAGTGATAATATCTCCTATTTTGGTTAA 741 0.4399 MKVVQLVKDNSENQTINVTPFIDLVQGQLAVSTRERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNVVRAEILKYKLREAHMIHSSHVAMLPSSGAVSIAAPPPPPPPPPPPPPPSLPQTSSSSSMYIQQRDPTTYTISSDNISYFG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01650 246 MobiDBLite consensus disorder prediction 194 246 - -
Spst9g01650 246 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 67 212 - -
Spst9g01650 246 ProSiteProfiles LOB domain profile. 70 171 IPR004883 -
Spst9g01650 246 MobiDBLite consensus disorder prediction 219 246 - -
Spst9g01650 246 Coils Coil 150 177 - -
Spst9g01650 246 Pfam Lateral organ boundaries (LOB) domain 71 168 IPR004883 -
Spst9g01650 246 MobiDBLite consensus disorder prediction 197 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01650 Spst-Chr9 16697714 16707279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01650 56 198 AS2 family AT2G40470 82.993 4.81e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst9g01650 LOB 2.4e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01650 9 16697714 16707279 Spst9g01650 9 16697714 16707279 ECH
Spst1g02013 1 28362643 28369801 Spst9g01650 9 16697714 16707279 ECH