Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01643 ATGGGCAGCGTTAGTAACATTGGCTTCGCTTCAGTGTTCAAAGTACCTTTGGATACGCAACTCCTTTCAAAGCAGATTCGGAACAAATCACCATGCGGATATATAGTTCCTCCTTATCTTAACTACTCTGTTAGCCTCACTCCAATATGTTGTAAACTGTCAGAAAGTGGGATTCAGGAGAACCTCACCACCCCCAGCAAGAGGATTTACAAGACCAAGGACAGGATGGAGGAGTACAACATAGCTATGAAGAGAATGATGAGGAACCCTTATGAGTATCACCATGATCTGGGTATGAATTATACTCTTATAACGGACTACTTGATCGTGGGCTCCCAACCGCAGAAACCCGAAGACATAGATCACCTCAAAAAAGAAGAGGGTGTGGCATACATTCTAAATTTGCAACAGGATAAGGATGTAGAGTATTGGGGAGTAGATTTGCAGTCAATAATAAGAAGGTGTCATGAACTTGAAATTATCCACATGAGAAGACCGGCAAAAGACTTTGATCCAGGATCCTTGCGAAGTGAACTACCTAAAGCAGTTGCATCCTTAAATTGGGCTGTTTCTGAGGGGAAAGGAAGAGTTTATGTACATTGTACTGCAGGGCTTGGAAGAGCTCCAGCGGTGGCAATTGCTTATTTGTTCTGGTTTTGTGGCATGAATCTAAATGGAGCATATGATATGCTAACTTCAAAGAGACCTTGTGGACCAAACAAAACAGCAATACGTGGAGCTACCTATGATTTGGCTAAGAATGATCCATGCAAGGAGCCATTTGAGAATCTTCCAGAATATGCGTTTGAGGATATAGCAGACTGGGAAAGAAACTTGATTCAAAATCGTGTTTCTACATATCTGATATTCCTACATGGATTGCCACCCTTGCTGGGATGGTCCCAGGTCCCATGA 915 0.4262 MGSVSNIGFASVFKVPLDTQLLSKQIRNKSPCGYIVPPYLNYSVSLTPICCKLSESGIQENLTTPSKRIYKTKDRMEEYNIAMKRMMRNPYEYHHDLGMNYTLITDYLIVGSQPQKPEDIDHLKKEEGVAYILNLQQDKDVEYWGVDLQSIIRRCHELEIIHMRRPAKDFDPGSLRSELPKAVASLNWAVSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCGMNLNGAYDMLTSKRPCGPNKTAIRGATYDLAKNDPCKEPFENLPEYAFEDIADWERNLIQNRVSTYLIFLHGLPPLLGWSQVP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01643 304 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 97 242 IPR029021 -
Spst9g01643 304 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 177 236 IPR000387 GO:0016311|GO:0016791
Spst9g01643 304 Gene3D Protein tyrosine phosphatase superfamily 83 288 IPR029021 -
Spst9g01643 304 ProSiteProfiles Dual specificity protein phosphatase domain profile. 100 257 IPR020422 GO:0006470|GO:0008138
Spst9g01643 304 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 83 288 - -
Spst9g01643 304 CDD DSP_laforin-like 99 246 IPR045204 GO:0019203
Spst9g01643 304 SMART dsp_5 100 242 IPR020422 GO:0006470|GO:0008138
Spst9g01643 304 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 49 257 - -
Spst9g01643 304 Pfam Dual specificity phosphatase, catalytic domain 121 240 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01643 Spst-Chr9 16619583 16622226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01643 40 284 Protein tyrosine phosphatase (PTP) family AT3G10940 74.286 1.05e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01643 - - gmx:100787079 487.263