Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01637 ATGAGTCATAAGTTTGATGAAGATGGGACATTCAAGCGCAGGAATGGAGGTCGCAACAAGCACGGCCGTGGCCACGTCAAATTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGATTTCTGGTGAGGAACATTGTTGAACAGGCGGCAGTCAGAGATGTGCAGGAGGCTTGCGTCTATGAACAATACACTCTTCCCAAACTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTTGTTAGGGTTCGATCCCGCACTGACAGGAGAAAGCGTGACCCTCCTCAACGTTTCATCAGGCGCAGGGATGATGCACCAAGACCTGGTCAGCCTGGTCAAGCCCCACGACCAGCTGGGGTAGGAGCTCCTGCCCGTGCTTAA 414 0.5193 MSHKFDEDGTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPARA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01637 137 Pfam Ribosomal protein S26e 10 114 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01637 137 ProSitePatterns Ribosomal protein S26e signature. 81 88 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01637 137 MobiDBLite consensus disorder prediction 94 137 - -
Spst9g01637 137 PANTHER 40S RIBOSOMAL PROTEIN S26 10 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01637 137 MobiDBLite consensus disorder prediction 98 118 - -
Spst9g01637 137 Gene3D Ribosomal protein S26e 10 122 IPR038551 -
Spst9g01637 137 FunFam 40S ribosomal protein S26 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01637 Spst-Chr9 16557162 16560942 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01637 10 124 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.348 7.31e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01637 K02976 - gmx:100781822 211.846