Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01632 ATGGTCGGATATCAGTTATTCAGGTCCTGTAATTTCAGAACCATTTTTTTTTCTTCCTTTTTCATCTTTCAATCTCGTCTTTTGCAGACATTCAAGCGCAGGAATGGAGGTCGCAACAAGCACGGCCGTGGCCACGTCAAATTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGATTTCTGGTGAGGAACATTGTTGAACAGGCGGCAGTCAGAGATGTGCAGGAGGCTTGCGTCTATGAACAATACACGCTTCCCAAACTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTTGTTAGGGTTCGATCTCGCACTGACAGGAGAAAGCGTGATCCTCCTCAACGATTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCAAGACCTGCTGGGGTAGGAGCTCCTACCCGTACTTGA 474 0.4916 MVGYQLFRSCNFRTIFFSSFFIFQSRLLQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPTRT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01632 157 PANTHER 40S RIBOSOMAL PROTEIN S26 30 150 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01632 157 Pfam Ribosomal protein S26e 30 134 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01632 157 MobiDBLite consensus disorder prediction 118 138 - -
Spst9g01632 157 FunFam 40S ribosomal protein S26 29 142 - -
Spst9g01632 157 Gene3D Ribosomal protein S26e 29 142 IPR038551 -
Spst9g01632 157 ProSitePatterns Ribosomal protein S26e signature. 101 108 IPR000892 GO:0003735|GO:0005840|GO:0006412
Spst9g01632 157 MobiDBLite consensus disorder prediction 115 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01632 Spst-Chr9 16539849 16541056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01632 30 144 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.348 8.80e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01632 K02976 - gmx:100784958 234.572