Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01615 ATGAGAGGTTTTCTTCTTGTTGTGTGGTTGTTGGAGCTGGTTTGTGTGGCGGTGACGGCGGTGAACCCCTCTCTGAACGATGACGTTTTGGGTTTGATTGTGTTCAAGTCTGACATACGAGATCCGAAGGGGAAGCTTGCGTCTTGGAGCGAGGACGATGAGAGTGCGTGTGGTGGTGGTGGTTGGGTTGGGGTGAAGTGCAACCCTAGATCCAACAGAGTAGTGGAGGTTAACCTTGACGGGTTCTCTCTCTCTGGGAGAATAGGTCGAGGGTTGCAAAGGTTGCAGTTTCTGAGGAAGCTTTCTCTGGCAAACAACAACCTCACTGGGGGGATAAACCCCAACATTGCTCGAATAGATAGCCTTAGGGTCATTGACTTGAGTGGCAATAGTCTCTCAGGGGAGGTCTCTGATGATGTTTTCCGACAATGTGGGTCTCTCCGGGCTGTTTCCTTGGCTAGGAACAGATTTTCTGGGTCTATTCCCTCTACTCTGGGGGGTTGTTCTGCTCTTGCTTCTATTGACCTTTCCAATAACCAGTTTTCTGGTTCTGTTCCCTCCGGCGTTTGGTCTTTGAGTGCTCTTAGGTCCCTAGATTTGTCTGAGAACTTGTTGGAGGGAGAGATTCCTAAGGGGGTTGAGGCAATGAAGAATTTAAGGAGTCTTAGCTTGGCAAAGAATCGATTGACTGGAAGTGTTCCTGGTGGGTTTGGGAGCTGTTCACTTTTGAGGTCCATTGATTTGGGGGATAATTCATTTTCTGGGAGTATTCCTGGTGATTTCAGGGAACTGACATTGTGTGGTTACCTTAGTTTGCGAGGGAATGCTTTCTCTGGAGGGGTTCCTGAATGGATTGGGGAGATGAGAGGTCTTGAGACGTTGGACCTTTCTAACAATGGGCTTACTGGTCAGGTGCCAAACTCTGTTGGAAATCTTCAGTCATTGAAGATGTTGAATTTTTCTGGGAATGGTTTCACTGGTAGTCTTCCTGAGTCTATGGCTAATTGCACGAAACTTTTGGTGTTGGATGTCAGCCGAAATTCGATGTCTGGATGGCTCCCATTGTGGATTTTCAAGTCGGATTTGGACAAGGTTTTGGTGTCGGAAAATGGAGCCAGTGGTAGCAAGAAAAGCCCTTTGTTTTCCTTGGCTGAAGTTGCAGTTCAAAGTCTTCAAGTTTTGGATTTGTCTCACAATGCATTTTCTGGTGAAATCACATCCGCTATTGGAGGTTTAAGCAGCTTGCATGTTTTGAATTTAGCTAATAACTCTCTTAGAGGTCCAATACCAGCTGCAATTGGTGAGTTGAAAACATGTTCTAGTCTTGATTTGAGCTATAATAAGCTAAATGGAAGCATACCGTGGCAAATAGGAGGAGCCGTGTCCTTGAAAGAACTGGTACTGAAAAAGAACTTCCTAATTGGGAAAATTCCAGCCTCCATTGAGAACTGCTCTTTGCTAACCACTCTGATTCTATCGCAGAACTGGCTTAGTGGCCCTATACCCACAGCAGTTGCAAAACTTACCAACCTGCAAAATGTGGACTTATCTTATAATAACCTTACTGGAAACCTTCCTAAGCAATTGGCCAACCTTGCCAATCTTCTTTCCTTCAATTTATCTCACAACAACCTTCAGGGTGAACTGCCGGCAGGTGTTTTTTTCAACACCATTTCGCCCAGCTCTGTTTCTGGCAATCCATCACTTTGTGGCGCTGCAGTAAACAAATCATGCCCTGCTGTCCTCCCAAAGCCTATTGTTCTAAATCCCAACACTTCTACTGATACTGGCCCGGGTGCAATGCCACAAAATTTGGGTCACAAAAGAATCATTCTCAGCATTTCGGCACTCATTGCCATTGGTGCAGCTGCTGTCATTGTAATTGGTGTTATTAGCATCACTGTTCTCAATCTCCGTGTTCGCACCTCCACATCTCGAGATGCAGCTGCCCTCACATTTTCTGCAGGAGATGAATTCAGCAGATCCCCGACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCGGGTGAGCCTGATTTCAGTTCCGGTGCGCATGCTTTGCTTAATAAGGACTGTGAGCTTGGCCGTGGAGGATTTGGAGCAGTGTACCAAACGGTTCTTAGAGATGGGCATTCAGTTGCAATAAAGAAGCTCACTGTATCAAGCCTTGTCAAGTCTCAAGAAGATTTTGAAAGAGAAGTGAAAAAATTGGGAAAAATCAGACACCAAAACCTCGTGGAACTCGAGGGTTATTATTGGACTCCGTCTTTGCAGCTTCTCATATATGAGTATGTATCTGGTGGTAGTTTGTATAAGCATCTCCATGAAGGATCTGGTGGAAACTTCCTCTCATGGAATGAGAGATTTAATGTAATTCTCGGAACGGCCAAGGCCTTGGCACACTTGCACCATTCCAACATTATTCACTATAACATTAAGTCAACCAATGTCCTTCTTGACACTTATGGTGAACCAAAGATAGGGGACTTTGGCCTAGCAAGACTGTTACCAATGCTTGACAGATACGTCTTGAGCAGCAAAATTCAGAGTGCACTCGGCTACATGGCACCAGAGTTTGCCTGCAAAACGGTGAAAATCACTGAGAAATGTGATGTATATGGGTTCGGTATCCTGGTTCTGGAGATCGTTACGGGGAAGAGGCCTGTTGAATACATGGAGGATGATGTGGTGGTACTTTGTGACATGGTGAGAGGGGCATTGGAAGAAGGCAGGGTGGAGGAATGCATTGATGAGAGGCTCCAAGGGAAGTTCCCAGCAGAAGAAGCCATTCCTGTGATGAAGCTGGGCTTAATATGTACTTCTCAAGTGCCTTCAAACAGACCTGACATGGGAGAGGTTGTTAACATATTGGAGCTGATAAGATGTCCCTCTGAGGGACAAGAAGAATTGGGATGA 2919 0.457 MRGFLLVVWLLELVCVAVTAVNPSLNDDVLGLIVFKSDIRDPKGKLASWSEDDESACGGGGWVGVKCNPRSNRVVEVNLDGFSLSGRIGRGLQRLQFLRKLSLANNNLTGGINPNIARIDSLRVIDLSGNSLSGEVSDDVFRQCGSLRAVSLARNRFSGSIPSTLGGCSALASIDLSNNQFSGSVPSGVWSLSALRSLDLSENLLEGEIPKGVEAMKNLRSLSLAKNRLTGSVPGGFGSCSLLRSIDLGDNSFSGSIPGDFRELTLCGYLSLRGNAFSGGVPEWIGEMRGLETLDLSNNGLTGQVPNSVGNLQSLKMLNFSGNGFTGSLPESMANCTKLLVLDVSRNSMSGWLPLWIFKSDLDKVLVSENGASGSKKSPLFSLAEVAVQSLQVLDLSHNAFSGEITSAIGGLSSLHVLNLANNSLRGPIPAAIGELKTCSSLDLSYNKLNGSIPWQIGGAVSLKELVLKKNFLIGKIPASIENCSLLTTLILSQNWLSGPIPTAVAKLTNLQNVDLSYNNLTGNLPKQLANLANLLSFNLSHNNLQGELPAGVFFNTISPSSVSGNPSLCGAAVNKSCPAVLPKPIVLNPNTSTDTGPGAMPQNLGHKRIILSISALIAIGAAAVIVIGVISITVLNLRVRTSTSRDAAALTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLRDGHSVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVELEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHHSNIIHYNIKSTNVLLDTYGEPKIGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDERLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01615 972 SMART LRR_typ_2 216 239 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 412 436 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 508 531 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 312 336 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 388 411 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 288 311 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 192 215 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 119 143 IPR003591 -
Spst9g01615 972 SMART LRR_typ_2 532 556 IPR003591 -
Spst9g01615 972 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 26 307 - -
Spst9g01615 972 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 766 967 - -
Spst9g01615 972 ProSiteProfiles Protein kinase domain profile. 689 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01615 972 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 308 582 - -
Spst9g01615 972 Gene3D Phosphorylase Kinase; domain 1 683 765 - -
Spst9g01615 972 Gene3D Ribonuclease Inhibitor 308 582 IPR032675 -
Spst9g01615 972 Gene3D Transferase(Phosphotransferase) domain 1 766 970 - -
Spst9g01615 972 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Spst9g01615 972 Pfam Leucine rich repeat 390 449 IPR001611 GO:0005515
Spst9g01615 972 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Spst9g01615 972 Pfam Leucine rich repeat 218 276 IPR001611 GO:0005515
Spst9g01615 972 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Spst9g01615 972 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 301 959 - -
Spst9g01615 972 CDD STKc_IRAK 695 961 - -
Spst9g01615 972 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 683 765 - -
Spst9g01615 972 Gene3D Ribonuclease Inhibitor 26 307 IPR032675 -
Spst9g01615 972 Pfam Leucine Rich Repeat 462 484 IPR001611 GO:0005515
Spst9g01615 972 SUPERFAMILY L domain-like 57 357 - -
Spst9g01615 972 Pfam Protein tyrosine and serine/threonine kinase 691 957 IPR001245 GO:0004672|GO:0006468
Spst9g01615 972 PRINTS Leucine-rich repeat signature 291 304 - -
Spst9g01615 972 PRINTS Leucine-rich repeat signature 508 521 - -
Spst9g01615 972 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Spst9g01615 972 SUPERFAMILY L domain-like 288 562 - -
Spst9g01615 972 SUPERFAMILY Protein kinase-like (PK-like) 693 956 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01615 Spst-Chr9 16370286 16373857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01615 1 972 Receptor kinase-like Gene Family AT3G56370 67.587 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Spst9g01615 PK_Tyr_Ser-Thr 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01615 - - gmx:100791629 1759.19