Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01613 ATGGCTGCAGGTTCTTCTTCAAATTGGGTCATGGAAAGTGCTCATGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTCAGGAATTCCTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGCTATTGGGCTTGACAAGTGGGGGGCAGAACACAATGAACGATAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGAATGACAGGCTACGAGCTACTTAAGAAAATTAAGGAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATAATGTCCTCTGAGAACATACCAACGCGGATTAACAAGTGTATGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTAAAAAAGCTGACATGTCAGTTAATGAATTGA 444 0.4189 MAAGSSSNWVMESAHDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNDRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCMEEGAQMFILKPLKQSDVKKLTCQLMN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01613 147 Gene3D - 19 147 - -
Spst9g01613 147 FunFam Two-component response regulator ORR5 18 147 - -
Spst9g01613 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Spst9g01613 147 CDD REC_typeA_ARR 20 141 - -
Spst9g01613 147 SMART REC_2 18 142 IPR001789 GO:0000160
Spst9g01613 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Spst9g01613 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Spst9g01613 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 145 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01613 Spst-Chr9 16344952 16346018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01613 2 147 Response Regulator Gene Family AT3G56380 67.568 2.63e-65 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst9g01613 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01613 K14492 - gmx:100778707 276.944