Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01609 ATGGAAGAGGTAATTAACTCCATTCAACGCGCTTCTAGTTTGGTTCAAAACCTCGAACAAGACCTATCCAACTTGGTGAACCACCCAGGTATGCTGTCCTTGTCCATTGATGAGATAACTGAGGCATTCACTGCTGCCAAGGACAGGCTGTTGCTAATTTCCCGACAGAACCAAACGCCGGAATCTCCTCCTACGTTGCTTCATGAAACCGCACCGCTGGAGCCTCAGATGGATGCTACCGTAATGCAGGAATGGTTAAGGTCTAGTCATCAGTTGTTTCAAATGCAACAGCTTCATGCTGCGAGGAGCACTTTGCAGATCGGTGAAATGGGAGGAGGGAGAGAGGTGGAAGATTCCGAGAGAACCATGGGATCTGAAGGAGATCAAGTGCAAGGAATCCACGCATCTTCTTCACGACCTCGAAGACGAAGCAGGGAAGGTAATCAAGAGAAGAAAAAAATATTGGTTCCTGCCCCACGTTTTGGAAACACAGAGCTGCCACCGGACGATTGTTTCACTTGGAGGAAATATGGGCAGAAAGAAATACTTGGATCCAAGTACCCAAGGAGTTACTACAGATGCACACACCAGAAGTTATATGAATGCCAAGCCAAGAAGCTCGTGCAAAGACTTGATCATAATCCTAACATATTTGAAGTAACATACAGAGGGAATCATACATGCCATATGTCCTCCACAGCACCATCGTCAGTTCCACCACAACAACTTCTGTTGGACATGACACAAAATAGTAACACAATTTCTGTTCAGTTGTCTCCGACAACGAATCTCAGCCTCAATCCAGGTGTTGGTGGTGGAGCCTCCACCTCAAGATACGGTGGTGATTGTCCTGTGGTGGATATGGCTGATGCTATGTTCAACTCCGGTAGCAGCAGCGGCAATAACAGCATGGAATTTCTCTTCTCTCCCACTGAAGATAGAAGTGATGCAAATTGA 957 0.465 MEEVINSIQRASSLVQNLEQDLSNLVNHPGMLSLSIDEITEAFTAAKDRLLLISRQNQTPESPPTLLHETAPLEPQMDATVMQEWLRSSHQLFQMQQLHAARSTLQIGEMGGGREVEDSERTMGSEGDQVQGIHASSSRPRRRSREGNQEKKKILVPAPRFGNTELPPDDCFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKLVQRLDHNPNIFEVTYRGNHTCHMSSTAPSSVPPQQLLLDMTQNSNTISVQLSPTTNLSLNPGVGGGASTSRYGGDCPVVDMADAMFNSGSSSGNNSMEFLFSPTEDRSDAN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01609 318 Gene3D WRKY domain 160 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g01609 318 SMART WRKY_cls 168 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01609 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 63 246 IPR044810 GO:0003700
Spst9g01609 318 SUPERFAMILY WRKY DNA-binding domain 166 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g01609 318 Coils Coil 1 28 - -
Spst9g01609 318 MobiDBLite consensus disorder prediction 139 153 - -
Spst9g01609 318 ProSiteProfiles WRKY domain profile. 169 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01609 318 Pfam WRKY DNA -binding domain 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01609 318 MobiDBLite consensus disorder prediction 108 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01609 Spst-Chr9 16328402 16330360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01609 1 315 WRKY Transcription Factor Family AT2G40740 39.939 2.38e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g01609 WRKY 8.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01609 - - pvu:PHAVU_009G043200g 497.664