Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01608 ATGAGCGCTCTTTCCCCTCCAACTACCTCAGCCACGAGCAAAAGGGTCGTCACAAAGCTTGTTCAGGGTCTCGGCTATGCCACTCAGCTCAAGTTTCTGCTTCAGAACCCTAATGGCCCTGATGGGTCTGTTTCAGCTAAGGAACTTTTGAACAATGTGCAGAGATCTTTCGCTGAAACGATATCTGTGTTGACTTCTTCCGAGGCTGCAAGTGTTGAAGAAGAGATTGCTCAGAATCTCGTAATTTCCGGGGAAGATGCCTCGCAGGTTGAAAGCATTGATCCCAGGTCTGAGGGTTCAACTGAGAGTAGAAGGAGATCGTTGCCCCTCTCAAGGGATCGCAGAGGTTCCTACAAAAGAAGTCAACAAACTTTGTTTGTCGGTGAATTGGGAGGTGGTGCTGAGAGGATTTGGCGAATTGGGACGAAGACTGAACAGACATGGACCATAGTTTCAAAAACTACCGATGATAATCATGCATGGAGAAAGTACGGACAAAAGGATATCCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGATGCAAAGCCACAAAACAGGTGCAACGGTTACAAGAGAATACTGATATGTTCAATATTACGTACATAGGCTTTCACACATGCAAAGACACCCTCAAGGCTCTACAAATGGTCACATATTCTGAAACCTGGGACTCATTTCTTGAGAATTCCCATCCAGACTCAAATGTGCCAAATGAACAACAGCAACATAGTCCTCCTATCAGATCTCAAAGCCCAATTGTTAAACAAGAATATCCCAATCATGATGAGACTGATCCGAGTGATCTTACAGATTCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGCCGAATGACAAGCCTTCCTTGAAAATAGCATCTGAAAATGCAGATACTGTATTTTCATGCACTGGGCTTTCGGAGTCTGGAAATGGATTTTGGGATTGCAAATCATGGAAATTTCTGAGTAATAGTATCATCCTTTATGGAAATTACATCGAATTTCACTCGGTTAGTTCGTCAAAGACAACTTTCTTGGTCAGGATTTAA 1074 0.432 MSALSPPTTSATSKRVVTKLVQGLGYATQLKFLLQNPNGPDGSVSAKELLNNVQRSFAETISVLTSSEAASVEEEIAQNLVISGEDASQVESIDPRSEGSTESRRRSLPLSRDRRGSYKRSQQTLFVGELGGGAERIWRIGTKTEQTWTIVSKTTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKATKQVQRLQENTDMFNITYIGFHTCKDTLKALQMVTYSETWDSFLENSHPDSNVPNEQQQHSPPIRSQSPIVKQEYPNHDETDPSDLTDSNLWSDLKDFELPNDKPSLKIASENADTVFSCTGLSESGNGFWDCKSWKFLSNSIILYGNYIEFHSVSSSKTTFLVRI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01608 357 MobiDBLite consensus disorder prediction 87 119 - -
Spst9g01608 357 Gene3D WRKY domain 141 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g01608 357 SMART WRKY_cls 155 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01608 357 Pfam WRKY DNA -binding domain 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01608 357 ProSiteProfiles WRKY domain profile. 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01608 357 MobiDBLite consensus disorder prediction 236 258 - -
Spst9g01608 357 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 30 250 IPR044810 GO:0003700
Spst9g01608 357 MobiDBLite consensus disorder prediction 97 119 - -
Spst9g01608 357 SUPERFAMILY WRKY DNA-binding domain 152 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01608 Spst-Chr9 16300612 16306118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01608 9 215 WRKY Transcription Factor Family AT2G40750 35.242 4.79e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g01608 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01608 - - vun:114164744 407.527