Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01585 ATGGAGACTCTGAAAGCAGCTATTCCAGAAAACCTGAAGCGAGCAATAGAGGATAGCACTGTCGATGATCTTCGAAGCACGTGCTCTTCTCTTCACCGCTTCTTTCTCCAATTCGACACATTTCACCAGATTATCACTCAACTGGCGGATCCAAAGTATGGTCTGTGCGGTAAGAGTAAGGAAGATGCCTTGAAATCCAAGCAGCTTGGTAATCAATGCTTCTCCAACGCAGATTATGCCAAGGCCTTGGACTGCTATACTCAGAGAAGAGTTCGACCCATTGTTTTCTGTCCTAGTGATACAGGGTTGAACTTTATGAAAATGGAGATTGGGAATGATAAGGCATTGCGCAAGGCTCCATTAGATACTGCTGATGTGAAAAGTAATCTTGTTGCAACATTATATATCAATCGTGCTACTGTATTGCATGCATGGTACCGCAGAGGTAAGGCAAATGCTTCATTGGGAAATTATAGAAATGCAATTTGCGACCTAAATGTGGCAAAGAGTGTGGAGTTTTCAATAGACGGGAAGAGACAAATAGAAAGTGAACTGAAAATTCTTTTAGACCAATGCAAAAGCACAAGTGCTTTAGTACAGAAACAACATAAGGAGAACAGCTGCAGCACTGTGGACACGGTTCTTCTTAGGGTTGCTAGAAGTGCACCAATATCCTTTGATTATAGGGTTAGCTTGAAGTGCACCCAACTCATAGTTCTATCACTGTTGCCACCACTGGAGCAGTCGCCGGAGCCATTGCTGAAGCAATCACTAGAGCAATCGTCGAAGTCGTCGCCATTGCCGGAATATTCACTGTTGTCGAAGCAGTTGCCGTCAGAGCTATTGTTGTCGGATCAACCGTTTTTTGAGTCGTCACAAGCCTGCTTCTCTCTCCGCAACATGGCAACTCCATTAAGCAATGCAAATCTTCCTCATTTACTAGATGACAATCGCCTTAATGGTCGAAATTATCTCCAATGGGCTCAATTTATCAGACGCATGTTGAAAGACTTGCTTCAAGCTACATGGAAAAAGAAAGCTCTCAATCGTTTAGCAGAACTAAAAGGACAACCCACAAGGAAGGCTTATCAAGCAACTTCAGATTTTGAAAATACTGGCAAGACTCTTTCATCCCCTGCAATTGAAGAAGGAATGCTTGCATTTCGTGTTGAAATTGACCAACTGAAATCTTCAATGGAATCCATCAGTGAGATTCCTCAAATGAAGCTACAGTGTGTCTCCATGCCTAATAAAGGAAGAGGCATGGTTTCGTCGTGTGTCATTTCACCAGGATCTTTGGTTCATTCTGAAGAACCTTATGCTATGATCCGAGCAGGTGGGAAAATGTTCAGGATATACCCAGAAAAAAATGACACTTTTAAAAATATGCCCAGTGATCTTGGAGAATATGCGGCTGAAGTTATCCAAAGCAGTGATTCTGAACAAGAAATTGAGGATATTACTGAACATAAACATGAATGTCAAGGCGTACATTGGCCTGTGGTATTGCCATCTGAGATTGTTTTGGCTGGCAGAATGCTAGCACGGCTTTTGCTGAATAGCACATCTGAAGATATTATAAACTTTGTGGAAAGGCTGGAGCTTTCTCATTGTTACGAACATATGTCATCTGAAAGAAAATTGGATTCACATATATATGCCATTGTATTGTTATATTGTCTTCAACACTCTTTTGGAGCTATGGTTTCCCCAGATGGAGTATCCATATCACAGGTTGTTTTGGTTGTCATAATTATCTCTCAAATTAAAGTGAATTGTATGACCGTTGTTCGTTTAAAATCAATAGACACTCATGGACTATCCGGTCATTTTGGAGAATTTTCATTTGAATCTGGTGCACATTCAACTAGTAATGTGGAACAGGTAAGAGTGGGTAAAGCTATTTATAAAGCTGCCAGTTTATTCAACCATTCTTGCCAACCAAATGCCCATGCATATTTTCTTTCGCGCACTCTTTACATACGAACCACAAATGGTGTAGCATCTGGGTGTCAGCTAGAATTGTCTTATGGTCCGCAGGTTGGGTTGTGGGATTGTCAAGATCGCCTTAATTTTCTCAAAGATGAATATGCATTTCATTGTCGGTGTATTGGTTGTTCAGAAGTTAATGTATCTGACATTGTCCTCAATGCCTTCCATTGTGTCAATCCAAATTGTTCTGGCGCAGTGTTAGAAAGCAGAGTACTTGACTGTGAACAGCAGAAAATCAAGCACTTCCCTATTACTGACGGTGTTGACAAGAATGATGACATTTATGAAGTATGTCTTGATGTCTTTAAGCAAAATGGGGCCTCTATTCATAGTCGACCAGGATACTGTTTGAAATGTGGTTCTAACTGTGATTTGGAGTCTTCACATGCTGCAGTGAGTAAAGCTTTAATATGCATAAGAAGGTTGCAGGATACAATATTGTCAAAAGAAATTTCAAGCATTACTATTTCTGATGCTTTGAGATCTCTTCAATTGCTTAGATCAAATTTGCACGCATACAACAAGTGTATTGCAGAGGCAGAAGACAGCATTGCTCAGGCATTTTGTTTAGTGGGAGAATTACAATTATCTGTTGATCATTGCAAAGCTTCTATCCAGATTCTGGAAAAGCTATATGATACTGATGATATTGTTATTGCTCATGAACTTGTGAAGCTTTCCTCCATCCAACTTTCCTTGGATGATTGTACTGCTGTCGAAAGCTTAAATCGAATAAATGATATATTCTCACGTTATTATGGACTTCATGCAGACTTGGTGTTCCCTTATCTTCAATATCTTAGGAGAGAAATTGAGAAATTTTCAGTGAAGGCCATCCAATAA 2835 0.4014 METLKAAIPENLKRAIEDSTVDDLRSTCSSLHRFFLQFDTFHQIITQLADPKYGLCGKSKEDALKSKQLGNQCFSNADYAKALDCYTQRRVRPIVFCPSDTGLNFMKMEIGNDKALRKAPLDTADVKSNLVATLYINRATVLHAWYRRGKANASLGNYRNAICDLNVAKSVEFSIDGKRQIESELKILLDQCKSTSALVQKQHKENSCSTVDTVLLRVARSAPISFDYRVSLKCTQLIVLSLLPPLEQSPEPLLKQSLEQSSKSSPLPEYSLLSKQLPSELLLSDQPFFESSQACFSLRNMATPLSNANLPHLLDDNRLNGRNYLQWAQFIRRMLKDLLQATWKKKALNRLAELKGQPTRKAYQATSDFENTGKTLSSPAIEEGMLAFRVEIDQLKSSMESISEIPQMKLQCVSMPNKGRGMVSSCVISPGSLVHSEEPYAMIRAGGKMFRIYPEKNDTFKNMPSDLGEYAAEVIQSSDSEQEIEDITEHKHECQGVHWPVVLPSEIVLAGRMLARLLLNSTSEDIINFVERLELSHCYEHMSSERKLDSHIYAIVLLYCLQHSFGAMVSPDGVSISQVVLVVIIISQIKVNCMTVVRLKSIDTHGLSGHFGEFSFESGAHSTSNVEQVRVGKAIYKAASLFNHSCQPNAHAYFLSRTLYIRTTNGVASGCQLELSYGPQVGLWDCQDRLNFLKDEYAFHCRCIGCSEVNVSDIVLNAFHCVNPNCSGAVLESRVLDCEQQKIKHFPITDGVDKNDDIYEVCLDVFKQNGASIHSRPGYCLKCGSNCDLESSHAAVSKALICIRRLQDTILSKEISSITISDALRSLQLLRSNLHAYNKCIAEAEDSIAQAFCLVGELQLSVDHCKASIQILEKLYDTDDIVIAHELVKLSSIQLSLDDCTAVESLNRINDIFSRYYGLHADLVFPYLQYLRREIEKFSVKAIQ 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01585 944 ProSiteProfiles SET domain profile. 408 678 IPR001214 GO:0005515
Spst9g01585 944 Pfam SET domain 612 678 IPR001214 GO:0005515
Spst9g01585 944 Gene3D Tetratricopeptide repeat domain 686 942 IPR011990 GO:0005515
Spst9g01585 944 Gene3D Tetratricopeptide repeat domain 56 172 IPR011990 GO:0005515
Spst9g01585 944 SUPERFAMILY SET domain 412 703 IPR046341 -
Spst9g01585 944 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 88 - -
Spst9g01585 944 Gene3D SET domain 571 677 IPR046341 -
Spst9g01585 944 SUPERFAMILY TPR-like 59 170 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst9g01585 SET 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01585 K24634 - gmx:100783548 895.19