Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01567 ATGAGTTCCGTCGAGTGCTATCCGTCACGCGGGGACGATGTCGCCGTCGTGTCGCTGGATTCTCTCCCGTTAGGGTTCCGATTCCGACCTACCGATGAGGAACTCATCGATTACTACCTGCGGCAGAAGATTAACGGTAATGGTGCCGAGGTTTGGGTTATCCGAGAAATTGATGTATGCAAATGGGAGCCGTGGGACATGCCTGATTTGTCGGTGATACGGAACAAGGATCCGGAATGGTTCTTCTTCTGTCCACAGGACAGAAAGTATCCAAATGGGCATCGATTGAACAGAGCAACGAGTCATGGGTATTGGAAGGCAACGGGGAAGGATCGTAAAATAAAGTCTGGAATGAGTTTGATTGGAATGAAGAAAACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAAGAGGACCAATTGGGTTATGCACGAGTATCGCCCCACCTTGAAGGAGCTTGATGGCACCAATCCTGGACAGAATCCATATGTCCTTTGTCGCTTGTTCAAGAAACAAGATGAGAGCCTTGAAGTTTCGCACTGTGACGAGGCAGAACAAACTGCTTCAACTCCAATTGCTGCCAATTACTCTACAGAGGAAATAGTTTCTGGTCTTGCTGTTGCTGCAGTGTCCCCATCACTGGTTACAGAGGACGCAAAGGATCAGGTAATTGTCCCTGCGCACTCTGAGGAAGAAATATCTAACGTTATAACTCCGGTTGATTGCCGTAGTGATGGATATGATGCTTCTGATGCACAAAATCAATATGTGGCACCATCAGCAGAGGAGTTTCAGCCATCGAACTTTGATATATTTTATGACCCAAAAAACGAGCTATTGGATGACAAATTATTCTCTCCTGTACTTGCACATATTCAACCAGAAATTCATTATCAACCAAACAGTGAATCAGATGGTCGATTCGGGCTTCAATATGGTACTAATGAGACAAACATTACAGACTTTCTGAATTCTGTTGTTAACTGGGACCAACTACCCTACGAGGAGTCCAATTGTCAACAGTGGAGCTACCCCTCATTCAATGTTCAGAATAACGTATTAGGCAGCGACATAGGTGCTGAACTTGCCAATATGACATATATGCAAGCTGATTACGCTGAGGAGGCAAACGACAGAAAGATTCCTTTGGTGATTACACCAGAATTTTGCAGCACCACTGGCATCCCCATTGAGCATGGTAGTGATGAGCAAAAGATCAATGTTGAGTTCTTTCAAAACAATTCCTTAACTGATGTTAATATGGGCCAAGTATACAATGTATTTAATGCTTATCAGCAAGAAAGCATCTTTAATACAGTTCCTAGTGGGGATACTGGAATCTTAAGGAGGACTCGAGTGGTACAAAATGAACAACTAAGTGCAAACTCAACACAAGGTACAGCACAAAGGAGAATTCGTTTGCAGCAGAAGGCACAGAATGAACTCTCAAATAAAATGGTGAAAAATAGAAGTTGTGTACAAGTGCCTAATTCAAAACAAATCACTGCTGTGGAGAAGAAAGCTTCACAAAAGCATGCTTCTGATGAAAGTGCTACTCTGACTGATGATGGTAATGAACAGAAGAAGAAGACACCTGAGTCAAATTGCAATAGAAAGATTTCCCGACAAGTTACAAAAGCAAGTTCCACCTTGGGGTTAAAAGATTTTTTATTACTCAGAAGGGTGCCACACATTTCAAAGGCTACCTCCAATCGTGCCAAGTGCTCTTCTGTTTTTGTAGTTTCAGCCTTTGTAATAGTCTCATTAGTGGTCTTCACTGACATCTGCGGATATCTTAAATTCTAA 1809 0.4301 MSSVECYPSRGDDVAVVSLDSLPLGFRFRPTDEELIDYYLRQKINGNGAEVWVIREIDVCKWEPWDMPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATSHGYWKATGKDRKIKSGMSLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLEVSHCDEAEQTASTPIAANYSTEEIVSGLAVAAVSPSLVTEDAKDQVIVPAHSEEEISNVITPVDCRSDGYDASDAQNQYVAPSAEEFQPSNFDIFYDPKNELLDDKLFSPVLAHIQPEIHYQPNSESDGRFGLQYGTNETNITDFLNSVVNWDQLPYEESNCQQWSYPSFNVQNNVLGSDIGAELANMTYMQADYAEEANDRKIPLVITPEFCSTTGIPIEHGSDEQKINVEFFQNNSLTDVNMGQVYNVFNAYQQESIFNTVPSGDTGILRRTRVVQNEQLSANSTQGTAQRRIRLQQKAQNELSNKMVKNRSCVQVPNSKQITAVEKKASQKHASDESATLTDDGNEQKKKTPESNCNRKISRQVTKASSTLGLKDFLLLRRVPHISKATSNRAKCSSVFVVSAFVIVSLVVFTDICGYLKF 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01567 602 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Spst9g01567 602 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Spst9g01567 602 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 276 - -
Spst9g01567 602 MobiDBLite consensus disorder prediction 506 537 - -
Spst9g01567 602 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Spst9g01567 602 FunFam Nac domain-containing protein 86 31 175 - -
Spst9g01567 602 SUPERFAMILY NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
Spst9g01567 602 MobiDBLite consensus disorder prediction 506 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01567 Spst-Chr9 15923287 15926226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01567 12 339 NAC Transcription Factor Family AT5G24590 47.399 3.56e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst9g01567 NAM 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01567 - - gmx:100777071 921.383