Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01557 ATGGGTTCAACAGGTGAGACTCAGATCACTCCGACCCATGTGTCTGATGAAGAGGCAAACCTGTTTGCCATGCAACTTGCCAGTGCCTCTGTCCTCCCAATGGTTCTCAAATCAGCTCTTGAGCTTGATCTGCTCGAAATCATAGCCAAAACTGGCCCTGGAGCTCATCTTTCTCCCTCTCAAATTGCTTCTCAGCTCCCAACACACAACCCTGATGCCCCTGTTATGTTGGACCGCATATTACGCCTTTTGGCTTGCTACAATATCCTCTCTTTCACTCTTCGCACTCTCCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTCGCCCCGGTTGCCAAATACTTGGTGAAGAACGAAGATGGCGTCTCCATTGCTGCTCTCAACCTCATGAACCAGGACAAATCAGAGAAACCTAAACCAAATCCTAAAATGACAAATGGGACCCTCCCACTGTACTACTTGAAAGATGCAGTTCTTGAAGGGGGCATTCCATTTAACAAGGCATATGGAATGACAGCCTTTGAATACCATGGAACAGATCCAAGATTTAACAAGGTTTTCAACAAGGGTATGGCTGATCACTCGACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGCTTTGAGGGTCTTAAATCTCTGGTTGATGTTGGGGGTGGAACTGGAGCAATCATAAACATGATAGTCTCAAAGTATCCCACCATTAAGGGTATTAACTTTGATTTAGCCCATGTCATCCAAGATGCCCCATCTTATCCAGGAGTGGAGCATGTCGGTGGAGACATGTTTGTGAGTGTTCCAAAAGCTGACGCAATTTTCATGAAGTGGATTTGTCACGATTGGAGTGATGAACACTGCTTGAAGTTTTTGAAGAACTGCTACGAGGCACTTCCAGACAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCAGTGGCTCCAGACTCTAGCTTGGCCACAAAGGGTGTGGTTCACATCGATGTGATAATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGGGCTGGATTCCAAGGTTTCCGTGTCTTATGTTGTGCTTTCAATACCTACATCATGGAGTTTCTCAAGAGGGTTTAA 1131 0.4598 MGSTGETQITPTHVSDEEANLFAMQLASASVLPMVLKSALELDLLEIIAKTGPGAHLSPSQIASQLPTHNPDAPVMLDRILRLLACYNILSFTLRTLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKSEKPKPNPKMTNGTLPLYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFEGLKSLVDVGGGTGAIINMIVSKYPTIKGINFDLAHVIQDAPSYPGVEHVGGDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGAGFQGFRVLCCAFNTYIMEFLKRV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01557 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 372 IPR029063 -
Spst9g01557 376 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Spst9g01557 376 Gene3D Vaccinia Virus protein VP39 116 374 IPR029063 -
Spst9g01557 376 Pfam O-methyltransferase domain 152 356 IPR001077 GO:0008171
Spst9g01557 376 PIRSF O-mtase 1 374 IPR016461 GO:0008168
Spst9g01557 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 374 IPR016461 GO:0008168
Spst9g01557 376 Gene3D - 1 115 IPR036388 -
Spst9g01557 376 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Spst9g01557 376 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Spst9g01557 376 PANTHER O-METHYLTRANSFERASE 23 355 IPR016461 GO:0008168
Spst9g01557 376 FunFam Caffeic acid O-methyltransferase 116 374 - -
Spst9g01557 376 CDD AdoMet_MTases 215 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01557 Spst-Chr9 15824954 15829805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01557 1 376 Monolignol Biosynthesis Gene Families AT5G54160 73.138 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01557 K13066 - gmx:100780100 694.115