Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01550 ATGGCCGATGCTCAAACTGCGTCGTTCTTTGCTGTGTTTCAAGAAATTGGTATTGGCTTTGAGGAAACTCAAGTCCTCTTCTCCAACAACCCTGACCTAACCTCTGCGTCTATAGAATCATTGCGCGCCCGCCTTCTCTGTCTACGCTCTCTCGACTTGGACCCTCTCGCTCTCGGCAAATTAATCACAAAGCGCCCAACTGTCCTAACAGACAACGAAATTGACCCTTTGTTAACCTTCCTTCGAGACGAATTGCAAGGAAAACTCCAGAAACAGCGACTGAATCGCCTCTTAACAAAAATTATTGTGAACTTGCCAAAGGTCTTGTGTGGCAGGTCGGTTGATGAAATCGATAGAACCTTAGCTTTCCTAGAACCCTTTGGTGGCATTGCTTTGATTTTGAAACGCCCTCAAATTTTGAACCATGATTTGGATGCTCAAATTATTCCTAGGGTCAATGTTCTGATGGAGCTTAGTGACGGAGATGCGGATAGTGTTGGGAAAGTGCTGGTTAGGTTTCCCATTTTTTTGAGCTATAGTGTGGAACATGTGGAGGGGCATGTAGGGTTTTTGAGTTCTTTTGCTGAGCTTGATTACAGACAGATATTTAGGATACTACAAGTGTATCCTGCTATTGTTACTGCTAGCAGAGAGAGGAAACTGCGACCTAGAATACAGTTTCTCAAGGAATGTGGGTTGGATTCGGATGACATCTTCAAGTTCTTGATTAAAGCGCCCACGTTTCTAAGCACTTCGTTCCATGTGAACATTGCACATAAGCTGGTTTTGCTAGTGAAGATTGGGTATAGGTACAGGAAAAAGGACTTCGCTGTGGCAATTAGGTCTGCTACTAGGACAAACAGTGTGAACATGCAGATGGTGATTGGTATGTTCTTGAATTATGGGTTTTCATGTGAAGAGATCGTTGCCATGAGCAAGAAGCATCCACAGATACTGCAGTATAATCACGCTTCTTTGGAGATGAAGATGGAGTACTTGATAGAGGAAATGGGGCGTGACATTGAGGAGTTACTGCTTTTCCCTGCATTCCTGGGGTACAAGTTTGATGATAGGATTAAGCATAGGTATGAAGTGAAGAAGAATGTTAGAGGAGCGGGAATGTCGATCAACAAGCTTTTAACGGTCTCTGATGAGACATTCGCTGGCAAACGTAAAAAGGCCCATGCATAG 1191 0.4383 MADAQTASFFAVFQEIGIGFEETQVLFSNNPDLTSASIESLRARLLCLRSLDLDPLALGKLITKRPTVLTDNEIDPLLTFLRDELQGKLQKQRLNRLLTKIIVNLPKVLCGRSVDEIDRTLAFLEPFGGIALILKRPQILNHDLDAQIIPRVNVLMELSDGDADSVGKVLVRFPIFLSYSVEHVEGHVGFLSSFAELDYRQIFRILQVYPAIVTASRERKLRPRIQFLKECGLDSDDIFKFLIKAPTFLSTSFHVNIAHKLVLLVKIGYRYRKKDFAVAIRSATRTNSVNMQMVIGMFLNYGFSCEEIVAMSKKHPQILQYNHASLEMKMEYLIEEMGRDIEELLLFPAFLGYKFDDRIKHRYEVKKNVRGAGMSINKLLTVSDETFAGKRKKAHA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01550 396 Pfam mTERF 12 265 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 Pfam mTERF 224 388 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 309 340 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 239 270 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 24 54 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 59 88 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 203 234 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 SMART mt_12 341 373 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 PANTHER CGI-12 PROTEIN-RELATED 12 125 IPR003690 GO:0003690|GO:0006355
Spst9g01550 396 Gene3D Transcription termination factor 3, mitochondrial 187 395 IPR038538 -
Spst9g01550 396 Gene3D Transcription termination factor 3, mitochondrial 3 160 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Spst9g01550 mTERF 5.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01550 - - pvu:PHAVU_009G045200g 676.781