Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g01544 | ATGGCTGCTATGGATTCCGGCGTTCAGGGTTGCATCTTATCCGTTTTAATTCTCCACGACGAGGAAATAGCAGTGACCGCCGAGAAGATCAGCGCTTTGTTGAAGGCCGCTAAAGTCTCCTTCGAGTCTTACTGGCCCAGCCTCTTCGCTAAGCTCGCTCAAAATAAGAACATCGAAGACCTCATCTTGAACGCCGGTTCTGGTGGAGGGGCCGCCGTTGCCGTTTCCGCTCCTGCCGCCAGTGGTGCTGGTGCAGCTGCCCCTGCACCCGCTGCCGAGGAAAAGAAGGAGGAAGTGAAGGAAGAAAGTGACGATGACATGGGATTTGGGTTATTTGATTAG | 342 | 0.538 | MAAMDSGVQGCILSVLILHDEEIAVTAEKISALLKAAKVSFESYWPSLFAKLAQNKNIEDLILNAGSGGGAAVAVSAPAASGAGAAAPAPAAEEKKEEVKEESDDDMGFGLFD | 113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g01544 | 113 | MobiDBLite | consensus disorder prediction | 91 | 107 | - | - | |
Spst9g01544 | 113 | Pfam | 60s Acidic ribosomal protein | 25 | 112 | - | - | |
Spst9g01544 | 113 | Hamap | 50S ribosomal protein L12 [rpl12]. | 9 | 113 | IPR027534 | GO:0003735|GO:0005840|GO:0006414 | |
Spst9g01544 | 113 | MobiDBLite | consensus disorder prediction | 83 | 113 | - | - | |
Spst9g01544 | 113 | CDD | Ribosomal_P1 | 9 | 112 | - | - | |
Spst9g01544 | 113 | FunFam | 60S acidic ribosomal protein P1 | 3 | 66 | - | - | |
Spst9g01544 | 113 | Gene3D | - | 7 | 66 | IPR038716 | - | |
Spst9g01544 | 113 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P1 | 4 | 113 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g01544 | Spst-Chr9 | 15651687 | 15652903 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g01544 | 4 | 113 | Cytoplasmic Ribosomal Protein Gene Family | AT5G24510 | 51.327 | 1.04e-32 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g01544 | K02942 | - | gmx:100801741 | 136.346 |