Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01532 ATGACCCATATTCGACTCATTTTGCTCTTATGTTTCCTACTTCCTCGTTTTCATGAAATCCTATGTAACATTGACACTGATACAGATGCCCTTCTTTCTTTCAAATCTCAAGTTAGTGACCCAACAAATGCCCTCTCTTCCTGGTCTCTACATTCCAATCACTGCACCTGGAAAGGTGTCACATGCTCCAAACTTGGAAACAAGGTCCAATCTCTCACTCTACCAGGACTTTCCCTCTCCGGCAAACTGCCCCCTCACCTTTCCAACCTCACTTACCTACACTCACTTGACCTTTCCAACAACAATTTTCATGGCCAAATTCCCAAAGACCTTGCCCATCTCTCACTTCTCAATGTCATTCAATTATCTTCCAACAATCTCAGTGGTACACTTCCACCACAGCTGGGTCATCTCCACCGTCTACAAGTTTTAGACTTTTCAGTCAATAATCTCACAGGTCCGATTCCTCCGTCATTTGCCAATCTATCTTCTCTTGAGAATCTTTCCTTGGCAACCAACGGTTTGGAGGGTGAGATTCCGTCCGAACTTGGTAATCTCCGCAATCTTTCCTTTCTTCAAATATCCGCGAACAATTTCTCCGGCCAGTTTCCCACTTCTATCTTCAACATCTCTTCCTTAGTCTTTTTATCCGTCACAGAAAACAATCTAGAGGGTGAGTTACCACAAAATTTCGGCCATGTTCTTCCAAATTTAAAGAATCTACATCTGGCATCCAATATGTTTGAAGGGATAATTCCGAATTCCATATCAAATGCCTCACATCTTCAATACATCGACCTTGCACACAATAAATTCCACGGCTCTATACCTCCATTCAGCAACTTGAAAAACCTAACCCACCTCATCCTTGGTAACAATTTTCTCTCTTCCACGACCTTGTTAAATTTTCAGTTCTTTGATTCCCTTAGAAACTCCACCCAGTTGCAAGATCTCCGGATCTATGAAAACCATTTGGCTGGGGAGCTTCCAAGCTCGTTTGCGAATCTATCTGCCAATCTCCAACATTTCTGTGTTTCTTATAACTCGCTTACTGGCAACATTCCTCAAGGAATGAAGAAATTTGAAAATATAATATCTTTGTCCTTTGAAAATAATTTCTTCACTGGAGAGTTGCCATCAGAAATAGGAGCACTGCATAATCTTCAGCAACTTCAAGTGCAGAACAATAGATTGTCTGGGGAAATTCCTAAGATGTTTGGCAATTTCACCAATCTGTATCTCCTAGCAATTGGAAATAACCAGTTCTCGGGCATAATTCATCAAAGTATTGGACAATGCAAGAGATTAACTTTTCTTGATTTGGCGATGAATAGGCTTGGTGGGACCATACCAAGGGAGATTTTTCAGATTTCTGGATTAAGAATCTTGAATTTAGAAGGAAACTCTCTGCATGGTTCACTTCCTCCTGAGGTCGGCACCTTGAAACAGCTTGAGACCATGAATATTTCTGGCAACCAGTTGTCAGGGAACATTCCTAAGGAAATGGAGGCTTGTTCTATGTTGAAGTCACTTGTGATGGCGAGAAACAAATTCAATGGATCAATCCCAACTAATTTTGGGAAATTAGCATCCCTCGAGACTTTGGATTTATCATCAAATGATCTCACCGGCCGTATTCCTGAAAGTTTAGAAAAGCTCCAGTATATACACACATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCAATGAAAGGTCTTTTTATGAGCCTTACTAAGTTTGATCTTCGAGGAAACAATAACCTCTGTAGCCCTAACAAGGAAACTGCGCAGAAATTGGGAGTACTCCTGTGTGTTGGCAAAAAGAAAAGAAAGATTTTACTCCCTATCGTACTTGCAGTTGTTGGTGCTACTGCTTTGTCCATTTCAACGCTCTTTGTATTTTGGACAATGATGTCTAGAGAGAAGAAAAGAAAGGAGGGGGAAATCAGTGTTTTATCTACCCCTCTTCAAGGGTTACCTCAAAATATATCTTACGGTGATATTCGCATTGCCACAAACAATTTTGCAGCTGAAAACTTGCTTGGAAAAGGAGGCTTTGGTTCTGTGTATATGGGTGTGTTCAGCTTCAGTACAGGTGAAACTGCCACGCTTGCGGTCAAAGTCTTGGACCTGCAACAAAGCAAAGCTTCCAAGAGTTTCAATGCTGAATGTGAAGTTTTGAAAAATGTTAGGCATCGGAACCTAGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAACGGGGAGGAATTTAAGGCCCTTGTCATGCAATTTTTGCCCAATGGAAACTTGGACGAGAACATACACCGGGAAGATGAAAAGTCAGGATCATTTCTAACCTTGATGCAAAGATTGAACATTGCCATTGATGTTGCTTCTGCTGTGGACTACTTGCACCATGACTGCGATCCACCAATAGTTCATTGCGATCTGAAACCCTCCAATGTCCTTCTAGATGAAAATATGGTTGCACGCGTTACAGATTTTGGATTGGCAAGGTTTCTCTCTCAGAATACATCAGAGAAGCAAAGTAGCACTCTAGGATTGAAAGGATCAATCGGCTACATCGCCCCAGAATACGGTCAAGGAGGCAAGACTTCAACTGAGGGCGACGTGTACAGTTTTGGGACCCTGCTGTTAGAGATGTTCACAGCCAAAAAACCAAGTGATGAAATGTTCAAAGAAGGATTGAGCCTTAACAAATTTGTCTCAGCCATGGATGAGAATGAAGTACTGAAGGTTGCTGATGGAAGGCTTATTAACGATTTTGAATCTTGGAAACAAAGCTCGAAGTGCATAGTTGATGTGATAAAAGTTGGGTTGTGTTGCACAACTGATCAACCCAAAAAACGATGGAGCATGAGAGAGGCCTCATCAAAATTGCAAGCAATTAAGCACTCTATGCTTGCCTTATGA 2925 0.4147 MTHIRLILLLCFLLPRFHEILCNIDTDTDALLSFKSQVSDPTNALSSWSLHSNHCTWKGVTCSKLGNKVQSLTLPGLSLSGKLPPHLSNLTYLHSLDLSNNNFHGQIPKDLAHLSLLNVIQLSSNNLSGTLPPQLGHLHRLQVLDFSVNNLTGPIPPSFANLSSLENLSLATNGLEGEIPSELGNLRNLSFLQISANNFSGQFPTSIFNISSLVFLSVTENNLEGELPQNFGHVLPNLKNLHLASNMFEGIIPNSISNASHLQYIDLAHNKFHGSIPPFSNLKNLTHLILGNNFLSSTTLLNFQFFDSLRNSTQLQDLRIYENHLAGELPSSFANLSANLQHFCVSYNSLTGNIPQGMKKFENIISLSFENNFFTGELPSEIGALHNLQQLQVQNNRLSGEIPKMFGNFTNLYLLAIGNNQFSGIIHQSIGQCKRLTFLDLAMNRLGGTIPREIFQISGLRILNLEGNSLHGSLPPEVGTLKQLETMNISGNQLSGNIPKEMEACSMLKSLVMARNKFNGSIPTNFGKLASLETLDLSSNDLTGRIPESLEKLQYIHTLNLSFNHLEGEVPMKGLFMSLTKFDLRGNNNLCSPNKETAQKLGVLLCVGKKKRKILLPIVLAVVGATALSISTLFVFWTMMSREKKRKEGEISVLSTPLQGLPQNISYGDIRIATNNFAAENLLGKGGFGSVYMGVFSFSTGETATLAVKVLDLQQSKASKSFNAECEVLKNVRHRNLVKVITSCSSLDYNGEEFKALVMQFLPNGNLDENIHREDEKSGSFLTLMQRLNIAIDVASAVDYLHHDCDPPIVHCDLKPSNVLLDENMVARVTDFGLARFLSQNTSEKQSSTLGLKGSIGYIAPEYGQGGKTSTEGDVYSFGTLLLEMFTAKKPSDEMFKEGLSLNKFVSAMDENEVLKVADGRLINDFESWKQSSKCIVDVIKVGLCCTTDQPKKRWSMREASSKLQAIKHSMLAL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01532 974 FunFam LRR receptor-like serine/threonine-protein kinase EFR 651 761 - -
Spst9g01532 974 Gene3D Ribonuclease Inhibitor 279 600 IPR032675 -
Spst9g01532 974 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 762 974 - -
Spst9g01532 974 ProSiteProfiles Protein kinase domain profile. 677 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01532 974 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Spst9g01532 974 SMART LRR_sd22_2 282 305 - -
Spst9g01532 974 SMART LRR_sd22_2 337 366 - -
Spst9g01532 974 SMART LRR_sd22_2 385 411 - -
Spst9g01532 974 SMART LRR_sd22_2 138 170 - -
Spst9g01532 974 SMART LRR_sd22_2 529 558 - -
Spst9g01532 974 SUPERFAMILY Protein kinase-like (PK-like) 658 964 IPR011009 -
Spst9g01532 974 Pfam Leucine rich repeat 508 566 IPR001611 GO:0005515
Spst9g01532 974 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Spst9g01532 974 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Spst9g01532 974 ProSitePatterns Protein kinases ATP-binding region signature. 683 709 IPR017441 GO:0005524
Spst9g01532 974 SMART serkin_6 677 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01532 974 PANTHER OS04G0122200 PROTEIN 32 183 - -
Spst9g01532 974 SMART LRR_typ_2 162 186 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 235 258 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 90 113 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 282 307 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 385 408 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 529 553 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 457 481 IPR003591 -
Spst9g01532 974 SMART LRR_typ_2 114 138 IPR003591 -
Spst9g01532 974 Gene3D Transferase(Phosphotransferase) domain 1 762 972 - -
Spst9g01532 974 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Spst9g01532 974 FunFam Leucine-rich repeat receptor protein kinase EMS1 203 301 - -
Spst9g01532 974 SUPERFAMILY RNI-like 71 438 - -
Spst9g01532 974 SUPERFAMILY L domain-like 354 594 - -
Spst9g01532 974 FunFam LRR receptor-like serine/threonine-protein kinase EFR 302 611 - -
Spst9g01532 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Spst9g01532 974 ProSiteProfiles Leucine-rich repeat profile. 261 283 IPR001611 GO:0005515
Spst9g01532 974 Gene3D Ribonuclease Inhibitor 172 278 IPR032675 -
Spst9g01532 974 Pfam Protein tyrosine and serine/threonine kinase 680 963 IPR001245 GO:0004672|GO:0006468
Spst9g01532 974 Gene3D Ribonuclease Inhibitor 22 171 IPR032675 -
Spst9g01532 974 Gene3D Phosphorylase Kinase; domain 1 659 761 - -
Spst9g01532 974 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 184 - -
Spst9g01532 974 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01532 Spst-Chr9 15519378 15522440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01532 25 969 Receptor kinase-like Gene Family AT3G47570 41.362 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst9g01532 PK_Tyr_Ser-Thr 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01532 - - gmx:100776054 1448.72