Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01531 ATGATTAATGCTCCATTTCTTTTCCTCTCTTGTTTCCTATTTCGTCATTTTCATGCCATTTCATGCAACACTAACACAGACAGAGATGCCCTTTTTTCATTCAAATCTCAAGTTAGTGACCCAACAAATTCCCTCTCTTCCTGGTCTCTACATTCCAATCACTGCACCTGGAAAGGTGTCACATGCTCCAAACTTGGAAACAGGGTCCAATCTCTCATTCTACCAGGACTTTCCCTCTCCGGCAAACTGCCCCCTCACCTTTCCAACCTCACTTACCTACACTCACTTGACCTTTCCAACAACAGTTTTCATGGCCAAATTCCCAAAGACCTTGCCCATCTCTCACTTCTCAATGTCATTCAATTATCTTCCAACAATCTCAGTGGTACACTTCCACCACAGCTGGGTCATCTCCACCGTCTACAAGTTTTAGACTTTTCAGTCAATAATCTCACAGGTCAGATTCCTCCGTCATTTGCCAATCTATCTTCTCTTGAGAATCTTTCCTTGGCAACCAACGGTTTGGAGGGTGAGATTCCGTCCGAACTTGGTAATCTCCGCAATCTTTCCTTTCTTCAAATATCGGCGAATAATTTCTCCGGCCAGTTTCCCACTTCTATCTTCAACATCTCTTCCTTAGTCTTTTTATCCGTCACAAAAAACAATCTAGAGGGTAAGTTACCACAAAATTTCGGCCATTTTCTTCCAAATTTAAAGAATCTACATCTGGCATCCAATAGGTTTGAAGGGATAATTCCGAATTCCATATCAAATGCCTCACATCTTCAATACATCGACCTTGCACACAATAAATTCCACGGCTCTATACCTCCATTCAACAACTTGAAAAACCTAACCCACCTCATTCTTGGTAACAATTTTCTCTCCTCCACAACCTCTTTAAATTTTCAGTTTTTTTATTCCCTTAGAAACTCTACCCAGTTACAAATTCTCATGATCAATGATAACCATTTGGCCGGGGACCTCCCAAGTTCTGTTGCTAATCTGTCTGGCAATCTCCAACAATTTTGTGTAGCTAATAATTTCCTTACTGGAGCACTACATGATCTACAGAAACTTGTGATATACAGTAACAGATTATCTGGGGAAATTCCGGACTTTTTTGGCAATTTAACAAATTTGTATACCCTTGGAATGGGAAATAACCAGTTCTCGGGTAGAATTCACCGAAGTATTGGACAATGCAAGAGATTAACTATTCTTGACTTGGGAATGAATAGGCTTGGTGGGACCATACCAAAGGAGATTTTTCAGCTTTCTGGCTTAACATCCTTGTATTTAGCAGGAAACTCTCTGCAAGGTTCGCTTCCTCCTAAGGTCGGCACCATGAAACAGCTTGAGACCATGGATATTTCTGACAATCAGTTGTCAGAGAACATTCCTATGGAAATAGAACACTGTTTTAGCTTGAAGTGGCTTATGATGGCAAGAAACAAATTCAATGGTTCAATACCAACTAATATTGGGAATTTGGCATCCCTTGAGACTTTGGATTTATCGTCAAACAGTCTCACTGGTCCTATTCCTGAAAGTTTAGAAAAGCTCGAGTATATACAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCAATGGAAGGTCTTTTTACGAACCTTACAAAGTTTGATCTTCGAGGCAACAATCAACTCTGTAGCCTTAGCAAGGAAAATGCGCAAAATTTAGGAGTACTCTTGTGTGTTGCTGGCAAAAATAAAAGAAAGATCGTACTCCCTACCATACTTGCAGTTGTTGGTGCTATTGCGTTGTTCATTTCAATGGTCTTTCTTTTTTGGACGATGAAGAAGAAAAGAAAGGAGAGGAAAACCAGTTTGTCATCTGCCCCCTTCAGGGGGTTGCCTCAAAATATAAAATATGGTGATATTCGGATAGCTACAGACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGGTTTTGGCTCTGTGTACAAGGGTGTGTTCAACTTCAGCAATGGTGAAACCGCCACACTTGCTGTCAAAGTCCTAGACCTGCAACAAAGCAAAGCGTCAAAGAGTTTCAATGTGGAATGTGAAGCTTTGAAAAATATTAGGCATCGGAACCTAGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGAGAGGAATTTAAGGCCCTTGTTATGCAATTCATGCCCAATGGCAACTTGGACGTGAACATACACCCGGAAGATGAAGAGTCAGGCTCCTTTCTAACCTTGATGCAAAGATTGAGCATTGCCATTGATGTTGCTTCTGCTGTGGACTACTTGCACCATGACTGCAATCCACCAATAGTTCATTGTGATCTGAAACCTGCCAATGTCCTTCTGGATGAAAATATGACTGCACATGTTGCAGATTTTGGATTGGCAAAGTTTCTGTCTCAAAACGCATCAGAGAAGCGGAGTAGTACTTTAGGACTAGAAGGATCAATCGGCTACATTGCCCCAGAATATGGTTTTGGAGGCAAGGCCTCAACCGAGGGCGATGTGTACAGTTTTGGGATCTTAATGCTTGAGATGTTCACAGGCAAAAGACCAACTGATAAAATGTTCAAAGAAGGATTAAGCCTCAGCAAATTTGTCTCTGCTATGGATGAGAATGAAGTACTAATGTTTGTTGATGGAAGGCTTATTGATGATCATGAATATTCAACACAAAGCTCAAACACTGATGACCATGGAAGTGGCTTTGAGAGCAAAACATATTGGACGCTTAAAGCTGAGGAATGCATAGCTGATGTGATAATAGTTGGGTTGTGTTGCACGGCTGATCAACCCAAAGAACGATGGAGCATTAGAGAAGCCTCATCAAAATTGCGAGCAATTAGGCACTCTATGCTGACTTCTTGA 2886 0.4096 MINAPFLFLSCFLFRHFHAISCNTNTDRDALFSFKSQVSDPTNSLSSWSLHSNHCTWKGVTCSKLGNRVQSLILPGLSLSGKLPPHLSNLTYLHSLDLSNNSFHGQIPKDLAHLSLLNVIQLSSNNLSGTLPPQLGHLHRLQVLDFSVNNLTGQIPPSFANLSSLENLSLATNGLEGEIPSELGNLRNLSFLQISANNFSGQFPTSIFNISSLVFLSVTKNNLEGKLPQNFGHFLPNLKNLHLASNRFEGIIPNSISNASHLQYIDLAHNKFHGSIPPFNNLKNLTHLILGNNFLSSTTSLNFQFFYSLRNSTQLQILMINDNHLAGDLPSSVANLSGNLQQFCVANNFLTGALHDLQKLVIYSNRLSGEIPDFFGNLTNLYTLGMGNNQFSGRIHRSIGQCKRLTILDLGMNRLGGTIPKEIFQLSGLTSLYLAGNSLQGSLPPKVGTMKQLETMDISDNQLSENIPMEIEHCFSLKWLMMARNKFNGSIPTNIGNLASLETLDLSSNSLTGPIPESLEKLEYIQKLNLSFNHLEGEVPMEGLFTNLTKFDLRGNNQLCSLSKENAQNLGVLLCVAGKNKRKIVLPTILAVVGAIALFISMVFLFWTMKKKRKERKTSLSSAPFRGLPQNIKYGDIRIATDNFAAENLIGKGGFGSVYKGVFNFSNGETATLAVKVLDLQQSKASKSFNVECEALKNIRHRNLVKVITSCSSLDYNGEEFKALVMQFMPNGNLDVNIHPEDEESGSFLTLMQRLSIAIDVASAVDYLHHDCNPPIVHCDLKPANVLLDENMTAHVADFGLAKFLSQNASEKRSSTLGLEGSIGYIAPEYGFGGKASTEGDVYSFGILMLEMFTGKRPTDKMFKEGLSLSKFVSAMDENEVLMFVDGRLIDDHEYSTQSSNTDDHGSGFESKTYWTLKAEECIADVIIVGLCCTADQPKERWSIREASSKLRAIRHSMLTS 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01531 961 ProSiteProfiles Leucine-rich repeat profile. 261 283 IPR001611 GO:0005515
Spst9g01531 961 FunFam Leucine-rich repeat protein kinase family protein 163 298 - -
Spst9g01531 961 FunFam LRR receptor-like serine/threonine-protein kinase EFR 614 728 - -
Spst9g01531 961 ProSitePatterns Protein kinases ATP-binding region signature. 650 676 IPR017441 GO:0005524
Spst9g01531 961 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Spst9g01531 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Spst9g01531 961 PANTHER OS04G0122200 PROTEIN 32 184 - -
Spst9g01531 961 SUPERFAMILY Protein kinase-like (PK-like) 619 950 IPR011009 -
Spst9g01531 961 Pfam Protein tyrosine and serine/threonine kinase 647 865 IPR001245 GO:0004672|GO:0006468
Spst9g01531 961 SUPERFAMILY L domain-like 24 300 - -
Spst9g01531 961 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 24 162 - -
Spst9g01531 961 Gene3D Phosphorylase Kinase; domain 1 627 728 - -
Spst9g01531 961 Gene3D Ribonuclease Inhibitor 22 234 IPR032675 -
Spst9g01531 961 SUPERFAMILY L domain-like 309 563 - -
Spst9g01531 961 PRINTS Leucine-rich repeat signature 498 511 - -
Spst9g01531 961 PRINTS Leucine-rich repeat signature 93 106 - -
Spst9g01531 961 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Spst9g01531 961 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Spst9g01531 961 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Spst9g01531 961 Gene3D Transferase(Phosphotransferase) domain 1 729 960 - -
Spst9g01531 961 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 729 961 - -
Spst9g01531 961 SMART LRR_sd22_2 545 564 - -
Spst9g01531 961 SMART LRR_sd22_2 450 469 - -
Spst9g01531 961 SMART LRR_sd22_2 312 338 - -
Spst9g01531 961 SMART LRR_sd22_2 138 170 - -
Spst9g01531 961 SMART LRR_sd22_2 235 261 - -
Spst9g01531 961 SMART LRR_sd22_2 498 527 - -
Spst9g01531 961 SMART LRR_sd22_2 282 303 - -
Spst9g01531 961 SMART LRR_sd22_2 402 428 - -
Spst9g01531 961 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 299 569 - -
Spst9g01531 961 SMART serkin_6 644 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01531 961 SMART LRR_typ_2 162 186 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 378 402 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 138 161 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 90 113 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 235 258 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 426 450 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 282 305 IPR003591 -
Spst9g01531 961 SMART LRR_typ_2 498 522 IPR003591 -
Spst9g01531 961 ProSiteProfiles Protein kinase domain profile. 644 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01531 961 Gene3D Ribonuclease Inhibitor 235 569 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01531 Spst-Chr9 15478531 15481646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01531 26 956 Receptor kinase-like Gene Family AT3G47570 40.778 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst9g01531 PK_Tyr_Ser-Thr 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01531 - - gmx:100776054 1458.74