Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01511 ATGGGAGGTTCATCGGAGACGAAGTTCCTGCAAGACCTGTTGTTGTATGCGGCGAGCGCGGCGCTTAGTTGCTTGGTGTTGTTTGTGGGGCTCAGGCACCTCGATCCTAATCGCGATGAAGCTTCCAAAAAGCTTCTTGAGCACAAGAAAGAGATTGCAAAGCGTCTCGGCCGCCCCCTCATTCAAACTAACTCTTATGAGGATGTTGTAGCCTGTGATGTTATAAATCCTGACCACATTGATGTGGAGTTCAACTCTATTGGGGGACTGGAAACAATCAAGCAAGCTTTGTTTGAGCTTGTTATTCTGCCTCTAAAAAGACCGGATTTGTTTTTACATGGTAAGCTTCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCACCTGGCACTGGAAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCGGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTTATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGTGGCTGCGGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCAATCATTTTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTACAACAGATCACGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTGTGGGATGGATTTACTACAGATAAGAATGCTCGAGTTATGGTTCTTGCAGCAACAAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGGCGTCTTCCTCAAGCCTTTGAAATTGGAATTCCAGACCAGAGAGAAAGGACAGAAATATTGAAGGTTATCTTAAAGGGTGAGAGGGTTGAAGACAACATAGACTTTGGTCATATAGCTGGCTTGTGTGAGGGTTACACTGGCTCAGATCTATTTGATCTTTGCAAGAAAGCTGCCTATTTTCCTATTAGAGAACTACTGGATGAAGAGAAGAAAGGAAAACGATCTCCTGCACCTGCACCTTTGTCCCAGTTAGATTTGGAGAAGGCCCTTGCCACTTCACAGAAGACAAAGATTGCTGCAAGTGAATACGGTGGATTCAGCCTTCAGACACCTTCAAGATGGTCGGTACCTGGTGATTCAGGTGATTCTCAGATTCAAGCTGCAATCAATGAATTCTCTAAGCTTGTGGTTTCTCACATGATTAACCTCCAACCAGAATCCCAGGATCCTTAA 1182 0.4442 MGGSSETKFLQDLLLYAASAALSCLVLFVGLRHLDPNRDEASKKLLEHKKEIAKRLGRPLIQTNSYEDVVACDVINPDHIDVEFNSIGGLETIKQALFELVILPLKRPDLFLHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDKNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERTEILKVILKGERVEDNIDFGHIAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRSPAPAPLSQLDLEKALATSQKTKIAASEYGGFSLQTPSRWSVPGDSGDSQIQAAINEFSKLVVSHMINLQPESQDP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01511 393 Gene3D - 81 338 IPR027417 -
Spst9g01511 393 Pfam ATPase family associated with various cellular activities (AAA) 123 252 IPR003959 GO:0005524|GO:0016887
Spst9g01511 393 ProSitePatterns AAA-protein family signature. 225 244 IPR003960 GO:0005524|GO:0016887
Spst9g01511 393 FunFam ATPase family AAA domain-containing protein 1 81 258 - -
Spst9g01511 393 Pfam AAA+ lid domain 275 311 IPR041569 -
Spst9g01511 393 Gene3D - 254 334 - -
Spst9g01511 393 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 344 - -
Spst9g01511 393 SMART AAA_5 119 255 IPR003593 GO:0016887
Spst9g01511 393 CDD RecA-like_ATAD1 86 251 - -
Spst9g01511 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01511 Spst-Chr9 15224560 15229156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01511 82 334 Calmodulin-binding Proteins AT3G56690 33.205 1.22e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01511 K22530 - gmx:100796908 716.457