Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01474 ATGGGGAAGAAAGGAGGCAGCTGGTTCTCCTCCGTCAGAAAAGTTTTCAAATCCTCTTCTAAGGGCTCGCCGGTGCCGGAGAAGAAGAAAGACAACAACAAGGAAGAGCAGTGGCAGCATGATGCGCCAGAAGAGGTATCTGTGGAGCATTTTCCTGCAGAGAGTTCTCCAGATATTACCAATGAAGGGAGTACCACGTCAACACCAGTGACTGAAGATAGAAGCCATGCTGTTGCCTTTGCAGCAGCAACTGCTGCCGCGGCTGAAGCGGCGGTGGCAGCTGCTCAAGCAGCCGCTAGAGTTGTGAGGTTGGCAGGATATGGACGCCAATCCAAGGAAGAAAGAGCTGCCATACTCATTCAATCATACTACAGAGGTTACCTTGCTCGACGTGCATTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTTGTGAGGGGTCATAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCATTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGCAGACTCCAGTTGGCTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTCCAAAGAGAACTAGAGGAACAAGAACAACCTAAGCTGCTTTTGAGCCCCATCAAAATGTTAGACATGGATGCTTGGGACAGTAGGCACCAAAGTAGTCAACAGATCAAGGAAAATGATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAGAAGCAATACATGCACATTGACCCAAATGGTGATGATATTGGAAGCTATACCAATGAGCCTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGTTGGATGTTATCACAATCACACAACTCAAGGCACTTTGGGCCACGGGAGAACCTTCATAGGACTCTCGCTACAACTACTTCCACCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACTCTGGACTCGGCCCATGCTAATATGGGCCTCATCCACCAAGAATCTTTTGACACAAGCCCAATATCCAATAGGCACCACCAGCGTCACCACAGTGCCGGTGTACCTAGCTATATGGCCCCAACCCAATCTGCAAAGGCCAAGGCTCGAAGTCAAGGACCGTTGAAGCATAGGGGTTCACCTGGGCCTCACTGGAACTCGTCCACGAGGAGAAGTTCTGCTATAGGGCTGGGCTGTGACTCATCTAGCTCCGGTGGGCCTACTGTAGCTCATGTGTTCCCGAGAAGTCCAAGCCCAAAAGTTAATGAGATTCGCCTCCAATCTAGACGGATTTCAAGTGGCAGCCCGGATAATATTTACATTGAGGATTGGGCCCTTCCAATTGGAACCAGTGGTTGGACTTGA 1395 0.4953 MGKKGGSWFSSVRKVFKSSSKGSPVPEKKKDNNKEEQWQHDAPEEVSVEHFPAESSPDITNEGSTTSTPVTEDRSHAVAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLAQEKFQRRVEEQVQRELEEQEQPKLLLSPIKMLDMDAWDSRHQSSQQIKENDLRKHEAAMKRERALAYAFNCQQQKQYMHIDPNGDDIGSYTNEPERAQMDWNWLERWMLSQSHNSRHFGPRENLHRTLATTTSTTDDMSEEKTVEMDMAATLDSAHANMGLIHQESFDTSPISNRHHQRHHSAGVPSYMAPTQSAKAKARSQGPLKHRGSPGPHWNSSTRRSSAIGLGCDSSSSGGPTVAHVFPRSPSPKVNEIRLQSRRISSGSPDNIYIEDWALPIGTSGWT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01474 464 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Spst9g01474 464 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Spst9g01474 464 MobiDBLite consensus disorder prediction 57 71 - -
Spst9g01474 464 MobiDBLite consensus disorder prediction 392 419 - -
Spst9g01474 464 SMART iq_5 112 134 IPR000048 GO:0005515
Spst9g01474 464 SMART iq_5 135 156 IPR000048 GO:0005515
Spst9g01474 464 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Spst9g01474 464 MobiDBLite consensus disorder prediction 351 430 - -
Spst9g01474 464 MobiDBLite consensus disorder prediction 23 48 - -
Spst9g01474 464 Gene3D - 110 164 - -
Spst9g01474 464 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Spst9g01474 464 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Spst9g01474 464 Pfam Protein of unknown function (DUF4005) 350 403 IPR025064 -
Spst9g01474 464 MobiDBLite consensus disorder prediction 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01474 Spst-Chr9 14858844 14862504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01474 1 435 IQD Protein Family AT3G49260 51.198 2.10e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01474 - - gmx:100808965 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01474 9 14858844 14862504 Spst9g01474 9 14858844 14862504 ECH