Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01462 ATGAATCCAAGATCTTCCGGGAAGAAGAAGATTGCCTTGCTCACACTCTTCGGCCTCGTATTGATCGCAGCATCGGCAGTTACTGCCGTTGCCGTCCGCTCTCGCATCACTACACGAGCAGACGGCTCAAGGCTCAAAGGGAAGCCTACACAAGCGATTTCACGCATGTGCGGTAAGACACGATTTCAGATGCTGTGCGTCAATTCGCTGCTAGACTTTCCGGGATCCCAAGCGGCATCCGAGAAGGACCTCGTCCACATTTCCTTCAACGTCACGTTGCAGCACTTCTCCAAGGCGCTCTACACCTCCGCCGCAATTTCCTACGCCACCATGGATCCCCGCGTTCGCGCCGCCTACGACGACTGCCTCGAACTCCTCGACGATTCCGTCGACGCGCTGGCCCGCTCCCTCAGCACTGTCTCCCTCGGCGCCGTTGGCTCCGCCAACGACGACGTGCTGACGTGGCTCAGCGCCGCGCTCACCAACCAGGACACCTGCTCGGAGGGCTTCGCCGATTCCGCCGGTCCTGTTACGGACCAGATGAGCAACAACCTCAAGGACTTGTCGGAGCTCGTCAGCAATTGCCTCGCCATTTTCTCAGCCGCTTCCGCCGGCGACGACTTCGCCGGCGTTCCCATTCAGAACAAGAGACGATTGATGACAATGCAAGACGATAAATTCCCGAGATGGTTGAATCGACGTGATAGGAGATTGCTTAGCTTGCCTCTATCGGCGATACAAGCCGATATTGTGGTTTCAAAGGACGGTAACGGAACCGTTAAGACCATCGCCGAGGCCATTAAGAAAGTGCCGGAATATAGTTCACGCCGCTTCATTGTCTACGTCAGGGCAGGAAGGTATGAAGAGGACAATTTAAAGCTGGGGAGGAAGAAAACAAATGTGATGTTCATGGGGGACGGGAAGGGCAAGACCGTCATCACAGGGGGAAGAAATTATATGGAGAACCTCACCACATTTCACACGGCATCCTTTGCTGCTAGTGGTTCTGGTTTCATCGCAAAAGACATGACATTCGAGAACTACGCCGGACCGGGGAAGCACCAAGCTGTGGCCCTCCGTGTCGGGGCGGACCACGCGGTGGTGTACCGCTGCAACGTCATTGGATACCAGGACACATTGTACGTCCACTCCAACCGTCAATTTTTCCGCGAATGCGACATTTACGGAACCGTCGACTTCGTATTCGGCAATGCTGCAGTGGTGTTCCAGAACTGCAGTCTCTGGGCCAGGAAGCCGATGCCCCTACAAAAGAACACCATCACGGCCCAAAACCGCAAAGACCCGAATCAGAATACGGGCATTTCGATCCACAACTGTCGGATCCTTGCCACACCGGATCTCGAAGCATCCAAGGCTGGGTACCCCACTTATCTGGGTCGTCCCTGGAAACTATTCGCCAGAACCGTGTACATGCTATCCTACATCGGGGATCACGTGCACCCACGTGGGTGGCTGGAGTGGAACACGTCATCGTTTGCTCTTGACACGTTGTACTATGGTGAATATATGAATTCTGGGCCGGGTGCGGCCCTGGGTCAACGCGTGAATTGGGCCGGGTATCGGGTCATCAATTCATCTGTTGAAGCTTCTAGATTCACGGTTGGCCAATTCATCTCGGGCTCATCGTGGTTGCCGTCTACCGGAGTTTCATTCATTGCTGGGTTATCAACCTGA 1695 0.5481 MNPRSSGKKKIALLTLFGLVLIAASAVTAVAVRSRITTRADGSRLKGKPTQAISRMCGKTRFQMLCVNSLLDFPGSQAASEKDLVHISFNVTLQHFSKALYTSAAISYATMDPRVRAAYDDCLELLDDSVDALARSLSTVSLGAVGSANDDVLTWLSAALTNQDTCSEGFADSAGPVTDQMSNNLKDLSELVSNCLAIFSAASAGDDFAGVPIQNKRRLMTMQDDKFPRWLNRRDRRLLSLPLSAIQADIVVSKDGNGTVKTIAEAIKKVPEYSSRRFIVYVRAGRYEEDNLKLGRKKTNVMFMGDGKGKTVITGGRNYMENLTTFHTASFAASGSGFIAKDMTFENYAGPGKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFFRECDIYGTVDFVFGNAAVVFQNCSLWARKPMPLQKNTITAQNRKDPNQNTGISIHNCRILATPDLEASKAGYPTYLGRPWKLFARTVYMLSYIGDHVHPRGWLEWNTSSFALDTLYYGEYMNSGPGAALGQRVNWAGYRVINSSVEASRFTVGQFISGSSWLPSTGVSFIAGLST 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01462 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 202 IPR035513 -
Spst9g01462 564 PANTHER PECTINESTERASE 24 552 - -
Spst9g01462 564 SUPERFAMILY Pectin lyase-like 244 561 IPR011050 -
Spst9g01462 564 CDD PMEI-like_3 56 204 - -
Spst9g01462 564 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Spst9g01462 564 NCBIfam pectinesterase inhibitor domain 42 200 IPR006501 GO:0004857
Spst9g01462 564 SMART PMEI_2 48 198 IPR006501 GO:0004857
Spst9g01462 564 FunFam Pectinesterase 49 202 - -
Spst9g01462 564 FunFam Pectinesterase 243 562 - -
Spst9g01462 564 Pfam Plant invertase/pectin methylesterase inhibitor 52 198 IPR006501 GO:0004857
Spst9g01462 564 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Spst9g01462 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 200 IPR035513 -
Spst9g01462 564 Gene3D - 243 562 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01462 Spst-Chr9 14719270 14723227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01462 2 563 Carbohydrate Esterase AT3G49220 68.198 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01462 - - gmx:100808236 962.214