Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01459 ATGTATGCTGAAACTGGTCTTATCTTCCCATATTTGCACAGCCTCTCTCAAGAGCTTCACCAGCTTGAGGAGTACTGCAAAACCCAGAAGTACAATGCTTTTTCAATGGATGATCTTCTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTCTTGAAGAACCTATCATGGACCTGGATCCCATGAGAGCCGCCATCTCAATGATATCTTGTGGGGAAGATGTTTCCTCCCAGGGACTAAAATCCACCGATATTGATATTCTTCAAAATGATCAATTTCTGAGTGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGATTCACCACTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGGACATTGATGAAAATGCAATTCAAGAAAACAAGCCACTTCCTGACATGCAATTAGGAAAGAGTATCAGCTCAGGAAGTTTAAGCTCAATGGACTGGATTCGTGGAGCTGCACTGAAGCCTGCTTTCATTGATATCCCTGCAATCGATTTCAATGCAGTTTATGGCATGCGGAGATCACTTAGTGAAGGAGATATAAAGACTCTTGGTAACGGAAACATGAACATTGTCCAATCACCCCTTGAGAGGCCCTTCCTTATCAGCAACTGCACCAGTGAAGAACGCTTCCAAAAGCTCTCCAGATACAGAAATAAGAGGACAAAGAGGAACTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAGAACTGAAGAATGTGAGAGCAAGAGGGAATGA 849 0.4287 MYAETGLIFPYLHSLSQELHQLEEYCKTQKYNAFSMDDLLQSSAMSEYDLAAEGDLFKAPEPILEEPIMDLDPMRAAISMISCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIDSPLSEILEIKVPLLDIDENAIQENKPLPDMQLGKSISSGSLSSMDWIRGAALKPAFIDIPAIDFNAVYGMRRSLSEGDIKTLGNGNMNIVQSPLERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEECESKRE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01459 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Spst9g01459 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Spst9g01459 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 146 276 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01459 Spst-Chr9 14668165 14672797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01459 207 279 C2C2-CO-like Transcription Factor Family AT5G57660 40.000 2.49e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst9g01459 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01459 - - gmx:100814332 487.648