Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01439 ATGATGGAGTGCAACAAGGATGAGGCAATTAGGGCCAAAGAAATTGCAGAGCGGAAATTTTCAGAGAGGGAATATGTTGGTGCGAAGAAGTTTGCTCTCAAGGCTCAAAATCTATACCCTGATTTGGAGGATATTACCCAGCTTTTGACAACAATTGATATCTATATATCTGCTGAGAATAAAGTAAGCGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGACTGTCAGGAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGAAGTTTGAAAGGATTCCAACATAATTCTTCCAATCATGTTGGATCTAAATCAGATGCACCCAATTCAAATGGTTTCTATAATTTAAAGAAGAATGTAACGGCAAATGTCAGGACTGGAAATAATAATGGTCGAGCACCTTCAACTGCAGTTCCTCCTCCACATAAAAAGGCTGATACCTTTTGGACTATCTGTAATCGGTGCAGGACACATTATGAATATCTCAGGATTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCTGTAGAGAGGGGTCCACCACCAAATGTTTTTAAGCCACCAAATTGGTCTTCTCATCAACGACATCAAAATTCTCAACACCATACTGGAAGTAATAATACAAACATTCAGTGGGGTTCTCACAATAGAATGGCTGGTTTTGGTAGCACAGACGGATCAACATCTGTTGCAGCACAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGAGAGGGTTCTTTTCACAAAGCTGAAAAACCTATGAAAAAAAGGAGGACTGATGATATTCGCGTTAATGGTTATCAAGGATACATGGCGAATCATATGACTGGGGGACATGGAGCAGCTGGTTTGGGCAGCATTTCTGAATCAGGAAAGGCTAACATGGAAACAGAAAGGAGTTATGGTTTTTCAGGTCTGCCTAGCAAGCATTACAGCACAAGAGAATTGTCAATGTTTGAAATACGAAACATGTTGATGGACAAGTCTCGCAATGAAATTAGGAAGAAACTTCAAGAATGGAAATCACTGGCCGAAGTTAAGATTAACAAGGATAAAGAGAATAAGAGACAGAAAAGTGCATATAATGGCAAAACAACTGGTACAGAAAAGCTGAGAGAGCCTGTTGTTAATGGTAATAGGCATCCAAACATTGATTCTTTTCCTGTTAGATCTGATGATACAGTTCAGAAGAACCAAGCTTATGTCACCATCAATGTTCCAGACCCAGATTTTCATAACTTCGACTTGGACAGAGATGAAAATTCCTTTGCAGAGGACCAGGTGTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCATAAAGCCATTTAAAATGCGGATCAGTTGGCTTAATTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGCTCTGGTTTTTATAAGACTTGTGGGGATTTCAGAACTGGAAAGCATGAAATATCTGAATCATTAAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCATGAGAGGTGTTGTTCGTATCTTTCCTGGAAAGGGGGAAGTCTGGGCTCTTTACAGAAACTGGTCTGCTGATTGGAATGAACATACCCCAGATGAAGTGATACATAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAATGAAGAACAGGGCGTATTAGTTACGCCCCTTGTTAAGGTTGCTGGTTTTAGGACTGTGTTTCAAAGGCATACAGATCGTGATCAGGAGAGAAGGATTCTTAAAGAGGAAATGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTGACTGGTCAAGAAGCTCAGAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCTACTCCCTTAGACCTCCTTCAGATAACGACAGAAGCTAACGAGACATCGGATAATGCTTAG 2091 0.4113 MMECNKDEAIRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNSSNHVGSKSDAPNSNGFYNLKKNVTANVRTGNNNGRAPSTAVPPPHKKADTFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKPPNWSSHQRHQNSQHHTGSNNTNIQWGSHNRMAGFGSTDGSTSVAAQAASVVQQASEKVRREGSFHKAEKPMKKRRTDDIRVNGYQGYMANHMTGGHGAAGLGSISESGKANMETERSYGFSGLPSKHYSTRELSMFEIRNMLMDKSRNEIRKKLQEWKSLAEVKINKDKENKRQKSAYNGKTTGTEKLREPVVNGNRHPNIDSFPVRSDDTVQKNQAYVTINVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYARIHKVISIKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEISESLNSFSHKVRWTKGMRGVVRIFPGKGEVWALYRNWSADWNEHTPDEVIHKYDMVEVLEDFNEEQGVLVTPLVKVAGFRTVFQRHTDRDQERRILKEEMFRFSHQVPNYLLTGQEAQNAPKGCRELDPAATPLDLLQITTEANETSDNA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01439 696 MobiDBLite consensus disorder prediction 294 310 - -
Spst9g01439 696 PANTHER BNAC03G44070D PROTEIN 2 679 - -
Spst9g01439 696 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Spst9g01439 696 MobiDBLite consensus disorder prediction 166 185 - -
Spst9g01439 696 Gene3D DnaJ domain 64 175 IPR036869 -
Spst9g01439 696 MobiDBLite consensus disorder prediction 235 262 - -
Spst9g01439 696 Pfam DnaJ domain 67 128 IPR001623 -
Spst9g01439 696 PRINTS DnaJ domain signature 103 123 IPR001623 -
Spst9g01439 696 PRINTS DnaJ domain signature 87 102 IPR001623 -
Spst9g01439 696 PRINTS DnaJ domain signature 69 87 IPR001623 -
Spst9g01439 696 SMART dnaj_3 66 123 IPR001623 -
Spst9g01439 696 Pfam Domain of unknown function (DUF3444) 456 662 IPR024593 -
Spst9g01439 696 CDD DnaJ 67 120 IPR001623 -
Spst9g01439 696 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Spst9g01439 696 MobiDBLite consensus disorder prediction 290 310 - -
Spst9g01439 696 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Spst9g01439 696 MobiDBLite consensus disorder prediction 136 158 - -
Spst9g01439 696 MobiDBLite consensus disorder prediction 237 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01439 Spst-Chr9 14426164 14428254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01439 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.197 9.06e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01439 - - gmx:100814722 1307.35