Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01429 ATGGGAGACCCAAACAGCATCGTACAAGAGCTACTACAAGGTTTGGAGTTTGCAAGGCAGCTCCAAGTGTACCTCCACATGCCTTCTTCGTCCCAAGAAACCCGTGACCTCCTCATCCAGAAGATCATATCCACGTTTGAAAAGGCACTTGAAATGGTAAATTGGAAAGGACCAGTTCCTGTGGGCGAGTCATCACAACTGCCCCTAGCAGCTGCAATCCGAATGTCAGACTCACCTATCAGCAGTAGTCCCCAAAGTGAAGACTCCGAGAGAGATATGAAAGACCACGACCACAGTGCTTTCAAAAGAAGAAACACTTTGCCAAGATGGACAAAACAGATTCGGGTTACACCAGGAATGGGGGTGGAAGGCCCTCTTGACGATGGATATAGTTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCATGTACCCCAGGGGCTATTACCGATGTACTCACAGAAATGTTCAAGGTTGCATGGCAACAAAGCAAGTGCAAAGATCTGATGAAGATCCTACAATTTTTGAAATCAATTACCGAGGAAAGCACACATGCACGGTGGCCAACAACATGGGTTCTTCTTCATCAAATCCCCTAGAAAACCAAGAACCAAGTTTGAACAACACAAATACTCAGCAGCAGAATATCTTGCAAAGCCTTGAGCAGCAACCAAATGAGTTACTTTTGAATCTCCGAGAAGGATTGAGAGTCCAAACAGAAAGCCTAGATTCCCCTGACCAATCATTTGCTCCATTCCGTTTCCCTTTGTCAACGAACATAGAAAATGAAGGTCAAGTTTTCCCTTCCCATGTGCTTGAAAACTTCGGTTCTCCTTATATGTCCCCTGCTACATCGGGAATAAGCCACTTTTCGGTGTCTCCAAGTGGGGTGAACAGATTTGGAGGGAACCCAAATTTGGCAACTTTTGAGTCCCAGATCAATGACATGATCCCAGCTGCTACTTCAACTACAAACTCAGCAGCCGTTGGTTTACAGTTTCCTTTCAACCAGTTTGAATTCGATGGCCAGAACCTAAGATTCGATAACCCATGA 1056 0.4527 MGDPNSIVQELLQGLEFARQLQVYLHMPSSSQETRDLLIQKIISTFEKALEMVNWKGPVPVGESSQLPLAAAIRMSDSPISSSPQSEDSERDMKDHDHSAFKRRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCMATKQVQRSDEDPTIFEINYRGKHTCTVANNMGSSSSNPLENQEPSLNNTNTQQQNILQSLEQQPNELLLNLREGLRVQTESLDSPDQSFAPFRFPLSTNIENEGQVFPSHVLENFGSPYMSPATSGISHFSVSPSGVNRFGGNPNLATFESQINDMIPAATSTTNSAAVGLQFPFNQFEFDGQNLRFDNP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01429 351 Gene3D WRKY domain 119 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g01429 351 MobiDBLite consensus disorder prediction 191 213 - -
Spst9g01429 351 FunFam WRKY transcription factor 53 112 189 - -
Spst9g01429 351 MobiDBLite consensus disorder prediction 76 104 - -
Spst9g01429 351 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01429 351 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01429 351 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 240 IPR044810 GO:0003700
Spst9g01429 351 MobiDBLite consensus disorder prediction 87 104 - -
Spst9g01429 351 ProSiteProfiles WRKY domain profile. 121 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g01429 351 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01429 Spst-Chr9 14249156 14250598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01429 5 267 WRKY Transcription Factor Family AT4G23810 36.207 8.06e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g01429 WRKY 3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01429 - - gmx:100776906 539.65