Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01424 ATGGAAGAGAGTATCCTATGCAAACACACAGTACATCACAGCGTCACCAAGAAGCTCCTCTCATCCAAAAAATCTCAATCCAATTCCACCTCAGAGCGCAGAATAGTCCGGATATCATACACTGATCCAGACGCCACCGACTCCTCCGGCGACGACGAAGCCTTCCCCTTCGTCCGCCAAAGAATCAAGAGCTACGTCAACCAGATTGAGATAGAAACAGCTACTGCCGCCGTCACTACCAACATCCCTTCCAATGCTCGCAAGAGGGCTGCAGCCGAGCCATGCCGCCGCCCAGTCAAGCTCCATGCCGGCAAGAAGTTCCGTGGCGTCCGCCAGAGACCGTGGGGGAAATGGGCCGCGGAGATTCGAGATCCGGCAAGAAGGGTGCGTCTCTGGTTGGGAACCTACGACACTGCAGAAGAAGCCGCCATGGTCTACGACAATGCTGCTATTAGGCTTCGCGGCCCTGACGCCTTGACAAACTTTGGAACACCGCCGCAAATAGAACCTCAACAGTCTGCGGCGGCAGAGGTTCAGGAAATGAAGGTCGCAGTGACGGAAGAAAACTCTGGGTCTGGGTACGACTCCGGAGAGGATCATTGCCACCACAACCTCTCCTCTCCCACTTCGGTGCTCCACTTCCGAAGCAACTCAAGCGAAGAAAATTCTGAGAAAACAGAAGAAGTGTTCAGAGAGTGTCAAGGTGAGACTGAAACGAGTCTGTTCGACGAAACGGGAGAGTTTTTGGCACTGGACAACATGCCTGCGTGGGATGACGTGTTCAATTTTGAAACCCCCGAGTACCCTCTTCTGTTTGAAGAAGAGCATGGATTACACGAGCCCCAGATGTTGGGCGAAATGATGGCGTTTTCCTCGGACGAAGGTTTCAGTGACAGTGGTAGTATTTTGCTTGCTGATTCGCTCATAGACTTCGACAAAGCGTGTCCTCCATCTACCCTCTGCCAAGTGGACGATTACTTCCAAGACATTTTGTTAGGTTCTGATCCTCTCGTTCTGCTCTGA 1023 0.5249 MEESILCKHTVHHSVTKKLLSSKKSQSNSTSERRIVRISYTDPDATDSSGDDEAFPFVRQRIKSYVNQIEIETATAAVTTNIPSNARKRAAAEPCRRPVKLHAGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIRLRGPDALTNFGTPPQIEPQQSAAAEVQEMKVAVTEENSGSGYDSGEDHCHHNLSSPTSVLHFRSNSSEENSEKTEEVFRECQGETETSLFDETGEFLALDNMPAWDDVFNFETPEYPLLFEEEHGLHEPQMLGEMMAFSSDEGFSDSGSILLADSLIDFDKACPPSTLCQVDDYFQDILLGSDPLVLL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01424 340 Pfam AP2 domain 106 155 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 CDD AP2 105 162 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 ProSiteProfiles AP2/ERF domain profile. 106 163 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 FunFam Ethylene-responsive transcription factor 2 105 164 - -
Spst9g01424 340 MobiDBLite consensus disorder prediction 18 52 - -
Spst9g01424 340 MobiDBLite consensus disorder prediction 188 226 - -
Spst9g01424 340 SMART rav1_2 106 169 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 238 - -
Spst9g01424 340 MobiDBLite consensus disorder prediction 203 217 - -
Spst9g01424 340 MobiDBLite consensus disorder prediction 20 36 - -
Spst9g01424 340 Gene3D AP2/ERF domain 105 164 IPR036955 GO:0003700|GO:0006355
Spst9g01424 340 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Spst9g01424 340 SUPERFAMILY DNA-binding domain 106 163 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01424 Spst-Chr9 14184463 14185485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01424 7 221 AP2-EREBP Transcription Factor Family AT4G27950 48.879 5.48e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst9g01424 AP2 8.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01424 - - gmx:100807598 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01424 9 14184463 14185485 Spst9g01424 9 14184463 14185485 ECH