Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst9g01424 | ATGGAAGAGAGTATCCTATGCAAACACACAGTACATCACAGCGTCACCAAGAAGCTCCTCTCATCCAAAAAATCTCAATCCAATTCCACCTCAGAGCGCAGAATAGTCCGGATATCATACACTGATCCAGACGCCACCGACTCCTCCGGCGACGACGAAGCCTTCCCCTTCGTCCGCCAAAGAATCAAGAGCTACGTCAACCAGATTGAGATAGAAACAGCTACTGCCGCCGTCACTACCAACATCCCTTCCAATGCTCGCAAGAGGGCTGCAGCCGAGCCATGCCGCCGCCCAGTCAAGCTCCATGCCGGCAAGAAGTTCCGTGGCGTCCGCCAGAGACCGTGGGGGAAATGGGCCGCGGAGATTCGAGATCCGGCAAGAAGGGTGCGTCTCTGGTTGGGAACCTACGACACTGCAGAAGAAGCCGCCATGGTCTACGACAATGCTGCTATTAGGCTTCGCGGCCCTGACGCCTTGACAAACTTTGGAACACCGCCGCAAATAGAACCTCAACAGTCTGCGGCGGCAGAGGTTCAGGAAATGAAGGTCGCAGTGACGGAAGAAAACTCTGGGTCTGGGTACGACTCCGGAGAGGATCATTGCCACCACAACCTCTCCTCTCCCACTTCGGTGCTCCACTTCCGAAGCAACTCAAGCGAAGAAAATTCTGAGAAAACAGAAGAAGTGTTCAGAGAGTGTCAAGGTGAGACTGAAACGAGTCTGTTCGACGAAACGGGAGAGTTTTTGGCACTGGACAACATGCCTGCGTGGGATGACGTGTTCAATTTTGAAACCCCCGAGTACCCTCTTCTGTTTGAAGAAGAGCATGGATTACACGAGCCCCAGATGTTGGGCGAAATGATGGCGTTTTCCTCGGACGAAGGTTTCAGTGACAGTGGTAGTATTTTGCTTGCTGATTCGCTCATAGACTTCGACAAAGCGTGTCCTCCATCTACCCTCTGCCAAGTGGACGATTACTTCCAAGACATTTTGTTAGGTTCTGATCCTCTCGTTCTGCTCTGA | 1023 | 0.5249 | MEESILCKHTVHHSVTKKLLSSKKSQSNSTSERRIVRISYTDPDATDSSGDDEAFPFVRQRIKSYVNQIEIETATAAVTTNIPSNARKRAAAEPCRRPVKLHAGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIRLRGPDALTNFGTPPQIEPQQSAAAEVQEMKVAVTEENSGSGYDSGEDHCHHNLSSPTSVLHFRSNSSEENSEKTEEVFRECQGETETSLFDETGEFLALDNMPAWDDVFNFETPEYPLLFEEEHGLHEPQMLGEMMAFSSDEGFSDSGSILLADSLIDFDKACPPSTLCQVDDYFQDILLGSDPLVLL | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst9g01424 | 340 | Pfam | AP2 domain | 106 | 155 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | CDD | AP2 | 105 | 162 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | ProSiteProfiles | AP2/ERF domain profile. | 106 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | FunFam | Ethylene-responsive transcription factor 2 | 105 | 164 | - | - | |
Spst9g01424 | 340 | MobiDBLite | consensus disorder prediction | 18 | 52 | - | - | |
Spst9g01424 | 340 | MobiDBLite | consensus disorder prediction | 188 | 226 | - | - | |
Spst9g01424 | 340 | SMART | rav1_2 | 106 | 169 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 33 | 238 | - | - | |
Spst9g01424 | 340 | MobiDBLite | consensus disorder prediction | 203 | 217 | - | - | |
Spst9g01424 | 340 | MobiDBLite | consensus disorder prediction | 20 | 36 | - | - | |
Spst9g01424 | 340 | Gene3D | AP2/ERF domain | 105 | 164 | IPR036955 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | PRINTS | Ethylene responsive element binding protein signature | 107 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | PRINTS | Ethylene responsive element binding protein signature | 129 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Spst9g01424 | 340 | SUPERFAMILY | DNA-binding domain | 106 | 163 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst9g01424 | Spst-Chr9 | 14184463 | 14185485 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst9g01424 | 7 | 221 | AP2-EREBP Transcription Factor Family | AT4G27950 | 48.879 | 5.48e-58 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Spst9g01424 | AP2 | 8.6e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst9g01424 | - | - | gmx:100807598 | 501.516 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst9g01424 | 9 | 14184463 | 14185485 | Spst9g01424 | 9 | 14184463 | 14185485 | ECH |