Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01405 ATGGATAGTCCTCCTACTCCATCTTACGTCGTGGTTGCATGTGATGCCACAAGGGACCGCACTGAGCACGAGATCAAACTCGTTGTTGATCATGTTCGGGCCAGGGGTTCCTTTCTCTCTTCTGGTGACAAGTTGCTTGTGCTTTGTGTATTGCACAAAGTGTCTCACCCTATGGGGTACCAGACGTTAGCATGTCCCGAGTCTTTTGCTGGAACGAACTTTCGTGCAATGGAGGAAGAAGTCAGAAAGAAAGTTGATGTATATGCTAGTGAGCTTTTATCAAGTTATGAAGATTTTGAAAGTGAAGGGGTTACTATTGAAATTAAAGTCACAGCGGGATTTCCAGTTAAACGGGTTGTTTTACAGGAGATTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGTCGCGACCTGAGGTACCACCTTAACAAGATTCCTTGTAAGGTTGCACTGGTTAAAGATGACTTGTCTCTGGAGATTTGGAGATCTCATTATACACATGACACAAAGGTCACAGCAACAAAGTTTGTATTCTCTTTGTCAAAGTTTGTGTCGCTATCAGATTGTCATAGTATTGAAGACCTTGAGCACTCCATTATCTCTTGCAAAAGCTATCCCCATTCTATAGTTGCTTCTGATACCTCTAGGACGATTAGGAGCTATACGAAGCAGTCAAGTGCTAACAGGTCGCGTGATCACAGTTCCGTATTAGAGTTTGGATCTTCTTCTAAGCACGAAAGATCAGGCATAAGCATTAAAGGAGAATATAGGTATCTCGTCACTTCTCTGATTGACCAAAAGCAAAACCAATGTGCCTTTCTGCCAAAACTTTCAGATGCACCGCTTCTTTGTACTGGCTGTGGGACAAGAACTGAGTTATCTATCAAGGAGTCAATGGGGTTCAGCTACTCTGACATACAACTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCACGTATACAAGGGCGTGCTTAAAGATGGACAGCAAATTGCCGCAAAGGTAAGGAAAGAAGAAAGTTCACAAGGATTTTCTGAATTTCATTCTGAGGTGTACGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGCAAAGGAAAGAAAAACATTCTGATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATAATGCAGCTGTTCTAGAGTGGCACCAAAGGTATGCTATTGCCATTGGGACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTGGTCCAATTATTCATCGGGACATGCGACCAAGCAATATACTTCTCACCCACGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCTAAATGGAAGACTGGTGATGAAACTCTACAAACAAGGATAATGGGCACATTAGGATACCTTGCTCCCGAGTATGCTGAAGACGGTATTGTTTCTGTGGGAACAGATGTGTATTCTTATGGCATCGTCCTATTACAATTGATATCAGGACGCCCAGTTGGCAATTCCAACAATCCAGAACAACCACAATCTCTCCGACAATGGGCTGAGCCAATGATAGAGAAGTTATCCTTACATGAACTGATTGACACTCGTCTAGGGGAATCATATGACACGTATGAACTGTACCTCATGGCTAAAGCAGCATACTTCTGTGTGCAGAGGAAGCCTGAGATGCGTCCATCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGTAGCCACTTCCACTCATTGGAAGATCAATTTGTTCCTAATTATAACGGTTAA 1821 0.4212 MDSPPTPSYVVVACDATRDRTEHEIKLVVDHVRARGSFLSSGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRAMEEEVRKKVDVYASELLSSYEDFESEGVTIEIKVTAGFPVKRVVLQEITNYNASWIILDRHLRRDLRYHLNKIPCKVALVKDDLSLEIWRSHYTHDTKVTATKFVFSLSKFVSLSDCHSIEDLEHSIISCKSYPHSIVASDTSRTIRSYTKQSSANRSRDHSSVLEFGSSSKHERSGISIKGEYRYLVTSLIDQKQNQCAFLPKLSDAPLLCTGCGTRTELSIKESMGFSYSDIQLATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKGKKNILIYEYICNKSLHWHLFENNAAVLEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDETLQTRIMGTLGYLAPEYAEDGIVSVGTDVYSYGIVLLQLISGRPVGNSNNPEQPQSLRQWAEPMIEKLSLHELIDTRLGESYDTYELYLMAKAAYFCVQRKPEMRPSMGEVVRLLEGESSHFHSLEDQFVPNYNG 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01405 606 ProSiteProfiles Protein kinase domain profile. 317 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01405 606 Gene3D Phosphorylase Kinase; domain 1 290 392 - -
Spst9g01405 606 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Spst9g01405 606 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Spst9g01405 606 MobiDBLite consensus disorder prediction 225 244 - -
Spst9g01405 606 CDD STKc_IRAK 323 588 - -
Spst9g01405 606 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 392 - -
Spst9g01405 606 Pfam Protein kinase domain 318 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g01405 606 SUPERFAMILY Protein kinase-like (PK-like) 302 586 IPR011009 -
Spst9g01405 606 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 393 597 - -
Spst9g01405 606 Gene3D HUPs 9 158 IPR014729 -
Spst9g01405 606 Gene3D Transferase(Phosphotransferase) domain 1 394 600 - -
Spst9g01405 606 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 285 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01405 Spst-Chr9 14034186 14037691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01405 290 589 Trihelix Transcription Factor Family AT4G32710 45.048 6.20e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst9g01405 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01405 - - vun:114163670 1118.61