Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01399 ATGTCTCAGGGAAGAGGCAGTGCATTATCTTTGATTTTGGTCACTGTGATTTCACTACTGTGCCTGTTGGTTCTTGTGGAACGTGTTAATGCAGCAACTTACGCAGTTGGAGGACCTGGCGGATGGACCTTCAACACTGATACTTGGCCCAATGGAAAAAAGTTCAAAGCTGGAGATGTGTTAATCTTCAACTATGACTCAAAGAACCACAATGTGGTTGCCGTGGACAAAAATGGATACAGCAGCTGCAAGACACCAGGGGGTGCAAAAGTGTTCAGTTCAGGGAAGGATCAAATCAGGCTAGCAAGAGGACAGAACTACTTCATATGCAACTATCCTGGTCACTGTGAATCTGGGATGAAGGTTTCCATTAATGCAGTGTGA 384 0.4505 MSQGRGSALSLILVTVISLLCLLVLVERVNAATYAVGGPGGWTFNTDTWPNGKKFKAGDVLIFNYDSKNHNVVAVDKNGYSSCKTPGGAKVFSSGKDQIRLARGQNYFICNYPGHCESGMKVSINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01399 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Spst9g01399 127 PANTHER BLUE COPPER PROTEIN 29 125 IPR039391 GO:0009055
Spst9g01399 127 CDD Plantacyanin 32 126 IPR041844 -
Spst9g01399 127 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
Spst9g01399 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Spst9g01399 127 Gene3D - 32 127 IPR008972 -
Spst9g01399 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Spst9g01399 127 FunFam basic blue protein-like 32 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01399 Spst-Chr9 13952976 13953633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01399 1 127 Phytocyanin Superfamily AT1G17800 39.716 2.04e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01399 - - gmx:100788635 216.853