Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01397 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCCACATCGTACAAAAATGCCAAGCTCTTCTCACTAAAGGGAACTGATGTTAGACCAGGCTTGTCCTCCCAAATTTTTGGTCCTGATTCTTATTCCAGCGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAATTGATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCCCCCTGATGTAGCCTATTCTAACCAGCTCAGAGCCAGTTCAGAAGCTTCTATGGTTGCCAATAACCCATTTGATTGTTCTTTCATGTCTGCAATGCATCATGATGGTTATCAGTCCAACTTTGGATCAGATTTGATGGAGAACGGAAGCCTCGATTCCCGTGACAATGATGGTCTAATGAGTTTAAAACTACAAGCATTGGAGAGGGCATTGCTTGATGATAGTGAGGCTGAGGAGGAGGAGCTGGAAGAGGAAGACATATTTGAGGCTGTTCAAAGCATGGAAATTGATCCAGACATTGCTGAGTGGTCTGATTCCATGCAGAATATGCTCCTCCATGATTCACCAAAGGAGTACTCTTCTTCAGATTCCAGCATTTGCAGCACCAAAGAAATATCACAGATTTCTCAGACCCCCAAGCAGCTCCTTTACGAATGTGCTATTGCACTTTCAGAAGGAAACGAAGAGGAAGGATCATCCATGATAAACAATCTCAGGCAGATGGTCTCAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCTGCTCGCTTGGCTGAATCCGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAACCTCCATCTTCAGACCGTCTAGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTTATTGCCGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAAAATTCATATCATAGACTTTGACATCAATCAAGGAAGTCAGTATATTAATCTAATCCAAACACTTGCTTCAAGGTCAAGTAAGCCACCCCATGTTAGATTGACTGGGGTTGATGATCCTGAGTCTGTGCAGCGACCTATTGGAGGCCTAAAGAACATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTAGGTTTGCCATTTGAGTTCCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCAACTGTAGTCCTGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTGAACGAACGGGACCAACTTCTTCGGTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTCGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTGCCTAGATTTGTGGAAGCCTACAATTACTACTCTGCTGTGTTTGAGTCACTTGATGTTACCCTTCCTAGAGAAAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCTTGTGAGGGTGAGGATAGGATAGAACGGTATGAAGTCGCAGGAAAATGGAGAGCCAGGATGACAATGGCTGGCTTCACTTCATCTCCAATGAGCACAAATGTGACTGATGAAATCCGAAAAATCATAAAGGTAATGTATTGTGACAGGTACAAAATAAAGGAGGAAATGGGTGCACTTCATTTTGGTTGGGAGGACAAAAATTTGATCGTTGCTTCAGCATGGAAGTTACCAAGATAA 1755 0.4359 MSLVRSADLAPTSYKNAKLFSLKGTDVRPGLSSQIFGPDSYSSESYEKYFHDSQTEELIEPSSSSISGSSIPPDVAYSNQLRASSEASMVANNPFDCSFMSAMHHDGYQSNFGSDLMENGSLDSRDNDGLMSLKLQALERALLDDSEAEEEELEEEDIFEAVQSMEIDPDIAEWSDSMQNMLLHDSPKEYSSSDSSICSTKEISQISQTPKQLLYECAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRPIGGLKNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRKIIKVMYCDRYKIKEEMGALHFGWEDKNLIVASAWKLPR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01397 584 ProSiteProfiles GRAS family profile. 201 581 IPR005202 -
Spst9g01397 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 179 576 IPR005202 -
Spst9g01397 584 Coils Coil 136 156 - -
Spst9g01397 584 Pfam GRAS domain family 211 581 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01397 Spst-Chr9 13896228 13897982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01397 1 581 GRAS Transcription Factor Family AT1G21450 60.570 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst9g01397 GRAS 4.7e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01397 - - gmx:100798897 1009.59