LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g01395	ATGCGAACTGGGATACCCCAAGTGCAAAGTTCCACGCTTTTTGTTCCTTCTCACTTAGTTGATCACTTCCCGGATTCTGTCACAGTTCAATTTCGCAATTTTCAACTCTTGAGATTCATGCGAGAGCTGTTTGGAGGTTGCTCCTTTAAGGGAGGTAGCGCAATTATAATGTTCAGAATCAAAGAATGTTTCTTGGTTTTGGTTTTCTTTGGTGTATGGCTTGTGTTTGATAAAACTCAACACCACGCACTTCTGTTGGATCACAATGAAGACTTTTGCCTTGAACTCGGGGTTGAAGTAGTACTTTCTGGGTTGAGAGTTGTGAACCCTGCCCAGTTTCTCACAAGCTGTTGTATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCCTCTCTTTTAAGATCAAATTCTGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGTCGCAGACATCTTTCCCTTCGCTTGTATCTCCCCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTGACTTCCATACTGAATCAATCTTTCCCAAATGGAGTTCCGAATCCCGGGCTATCTGGTCCAGGAAGTAGCCAACGTGGAGCAATTGATTCTGGAGCTGAAACAGATCCACTCTCCACAGTTGGTAATGGAATGAGCTTCAATAATTCTTCTTCCACGTTTGTACAGCCAAATATAGTTAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACTCTTCTAGTAACCATATGTTGCCAGATCAACAACATTCTCAACAGCTTGAACCTCAAAATTTCCAACACAGTCAGCAGTCAATACAACAGTTCTCTGCTCCCCTAAATGCACAGCAACTGCCACCACAACAGCATTTTCAATCAATTCGAGGAGGTATAAGTGGTATGGGACCAGTAAAGCTAGAACCCCAGGTAAGCAACGATCAACTTGGACAGCAGCAGCAGCCACCGTTGCAATCATTAAGGAATCTTACTTCAGTGAAATTAGAGCCACAACAAATGCAGACAATGAGAACACTGGGACCTGTTAAAATGGAGCCTCATTCTGATCAACCATTATTTTTGCAGCAACAACAGCAACAACAACAACAATTCCTCCACATGTCAAGTCAATCATCGCAGGCTGCTGCTGCCCAGATCAATCTTTTGCGCCATCACAGGCTTTTACAGTTACAACAACAACACCAGCAGCAACAAATCTTGAAGGCAATGCCTCAACAACGGTCCCCACTACCACAGCAATTTCAACAGAACTTGCCAATGAGATCTCCTGTGAAACCAGCCTATGAACCTGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAATATTGAGTTCTGGAGAAAGTTTGTTGCCGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGCGTTTCTATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAGCCTGGACGTGGTTTTGAAGCAACTGTCGAGGTTCTTCCCCGGCTTTTCAAGATAAAGTATGAAAGTGGTACCTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCGTCTGGTCAGATTGTTCTAGACTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTACGCGTTGTTCGGGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTAGGCGCCATGAGGAGCTAATACCCAGGAGATTGTTAATACCACAGGTTAGCCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACACCCAATATATCTGTTCCAGAATTACAGAACAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTTCCATTGGTTAACGATTTAGGATACACAAAGAGATATGTCCGCTGCCTACAGATATCAGAAGTTGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACTGCAACTGGACCTATGGATAGCTTGGCAAAATTCCCTCGGAGAACAAATGGTTCATCTGGACCTCGTGGTCAAGCACAACAGCATGAACAACAATTACAGCAACAGCAACAAATGGTGGCCCATAACTCAAATGGCGATCAAAACTCAGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTCAGTGTAAATAACAACGTCAACTCAGCATCCACATCAACCACCACAAGTACTATTGTTGGACTTCTCCACCAGAACTCAATGAATTCTAGACAACAAAGTTCAATGAACAATGCAAGCAGTCCATACGGAGGTAGTTCTGTTCAGATTCCGTCCCCAGGTTCCTCCAATACGGTGCCCCAGGCCCAGCCAAACTCTTCCCCTTTTCAATCTCCAACCCCATCTTCTAACAACCCTCCACAAACGTCTCACCCTACTTTAACATCTGCCAATCACATGAGTACAACTAACTCACCAGCTAATATTTCCATGCAACAGCAGCAGCCATCTATTTCTGGTGATCCTGACCCTAGTGATACTCAAAGCTCAGTCCAGAAAATCATACATGAAATGATGATGTCCTCACATATTAACGGCACAGGTGGAATGGTCGGTGTTGGTTCTCTTGGAAATGATGTGAAAAATTTAAATGGTATTCTGCCAGTGAGTGCCAATACAGGGCTTAATGGTGGAAATGGCTTGATGGGTAACGGCTCAATGAACAATAATTCAGGCGTTGGGATTGGTAATTATGGCACAATGGGTCTTGTTCAATCCGGTATGCCTAATGGAATGAGAGCTGCTATGGTAAATAATTCAATCTTGAATGGAAGGGGAGGAATGGCATCTCTTGCTCGGGATCAAGCAATGCATCATCAGCCGGAATTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA	3069	0.4353	MRTGIPQVQSSTLFVPSHLVDHFPDSVTVQFRNFQLLRFMRELFGGCSFKGGSAIIMFRIKECFLVLVFFGVWLVFDKTQHHALLLDHNEDFCLELGVEVVLSGLRVVNPAQFLTSCCMVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGSSQRGAIDSGAETDPLSTVGNGMSFNNSSSTFVQPNIVNAASSGQGQGQQFSNSSSNHMLPDQQHSQQLEPQNFQHSQQSIQQFSAPLNAQQLPPQQHFQSIRGGISGMGPVKLEPQVSNDQLGQQQQPPLQSLRNLTSVKLEPQQMQTMRTLGPVKMEPHSDQPLFLQQQQQQQQQFLHMSSQSSQAAAAQINLLRHHRLLQLQQQHQQQQILKAMPQQRSPLPQQFQQNLPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNISVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETATGPMDSLAKFPRRTNGSSGPRGQAQQHEQQLQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNNNVNSASTSTTTSTIVGLLHQNSMNSRQQSSMNNASSPYGGSSVQIPSPGSSNTVPQAQPNSSPFQSPTPSSNNPPQTSHPTLTSANHMSTTNSPANISMQQQQPSISGDPDPSDTQSSVQKIIHEMMMSSHINGTGGMVGVGSLGNDVKNLNGILPVSANTGLNGGNGLMGNGSMNNNSGVGIGNYGTMGLVQSGMPNGMRAAMVNNSILNGRGGMASLARDQAMHHQPELSNQLLSGLGAVNGFNNLQFDWKPSP	1022

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	701	747	-	-
	Spst9g01395	1022	Pfam	LIM-domain binding protein	452	706	IPR029005	-
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	790	833	-	-
	Spst9g01395	1022	PANTHER	LIM DOMAIN-BINDING PROTEIN	154	1011	IPR029005	-
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	192	283	-	-
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	710	747	-	-
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	790	884	-	-
	Spst9g01395	1022	MobiDBLite	consensus disorder prediction	841	884	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst9g01395	Spst-Chr9	13883460	13891257	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst9g01395	119	1018	C2H2 Transcription Factor Family	AT1G43850	58.404	0.0	763

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst9g01395	-		-	gmx:100799771	1445.25