Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01358 ATGCCTCCACGGCGGTGCACAGCGTCTGCGGGGCAGACAGGAAGCCGAGACAGCAACGTGGATGGGGTCATCATGCAGTGCCTCTCCTGTGAGGAGGATTACGAGGTGGACGACTCTGGAACCTGCAGGGAGTGCTACCAAGAGGCCAACGAGGCTGAGGAAGAGCTCCGTCTCGAGATCAGCGACCTCAAATCGAAAGTCTCCTTCCTCACACTCTCCTCTCCCACCCTCGATTCATCTACTGCAGATATTGTCCTAGTTGCTGTTGACGACTCTGACGCGGTCCCCATTCCTGCTCATAAGCACATTCTGGTTAGTCGCTCTCCTGTTTTCAATGCAATGCTAGAGAATGATATGGAGGAAAGGCGGAGTGGCACCATCAGGATTTCTGACGTATCAGATGATACCCTTCGTGCTTTCGTTAACTATTTATACACCGCTGAAGCGTCCCTTGATAACCAAATGGCCTGTAACCTGTTGGTTTTGGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATACTGTGAGAAGTATTTGATCGCCAAAATGAATTGGAATAAGGCTATTGCAAACTATGCCTTTGCATATCAATACGATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATTTTGGAAAAAATGGATTTGCTCACTCAAAATGAATATTATGCGGAGCTCGTGGACACTAATCCTCGTCTTGTCGTGGAAATATATGAAACATATATTGGCAAGCAAATTAATACTGCAGGGGCGTTTTAG 762 0.4738 MPPRRCTASAGQTGSRDSNVDGVIMQCLSCEEDYEVDDSGTCRECYQEANEAEEELRLEISDLKSKVSFLTLSSPTLDSSTADIVLVAVDDSDAVPIPAHKHILVSRSPVFNAMLENDMEERRSGTIRISDVSDDTLRAFVNYLYTAEASLDNQMACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAIANYAFAYQYDCKQLRSASLAVILEKMDLLTQNEYYAELVDTNPRLVVEIYETYIGKQINTAGAF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01358 253 Pfam BTB/POZ domain 80 181 IPR000210 GO:0005515
Spst9g01358 253 PANTHER SPECKLE-TYPE POZ PROTEIN 62 246 - -
Spst9g01358 253 SMART BTB_4 82 183 IPR000210 GO:0005515
Spst9g01358 253 Gene3D - 185 252 - -
Spst9g01358 253 CDD BTB_POZ_ZBTB_KLHL-like 82 166 - -
Spst9g01358 253 SUPERFAMILY POZ domain 77 180 IPR011333 -
Spst9g01358 253 ProSiteProfiles BTB domain profile. 82 153 IPR000210 GO:0005515
Spst9g01358 253 Coils Coil 46 66 - -
Spst9g01358 253 Gene3D Potassium Channel Kv1.1; Chain A 52 184 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst9g01358 BTB 6.2e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01358 K10523 - gmx:100794118 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01358 9 13284677 13287507 Spst9g01358 9 13284677 13287507 ECH